Protein Alignment pch2 and AT3G27120

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001319654.1
• Gene: AT3G27120 / 822331
• AraportID: AT3G27120
• Length: 680
• Species: Arabidopsis thaliana
• Alignment Length: 398
• Identity: 89/398 - (22%)
• Similarity: 147/398 - (36%)
• Gaps: 116/398 - (29%)

  Fly    24 NAIRNNVETALKAYFQTARKLPRNVSFLPDLTAEQTEHVHSVLLERDNGGVQPLKVAETKFRFHF 88
            :|:.::..|.|:.......:||..   |.:|.....|||.:.:::||           ...|:
plant   354 DALDDSTRTCLEMLCGPDGELPEK---LRNLEPRLIEHVSNEIMDRD-----------PNVRW-- 402

  Fly    89 YATRPEEGQLGLFSGEEGSDGIDSIVAASHALLPAAQFVGLWENLIYETGLKEKLLKFALSALMF 153
                                  |.|....||.....:.| :|..      |:..:.|...|.
plant   403 ----------------------DDIAGLEHAKKCVTEMV-IWPL------LRPDIFKGCRSP--- 435

  Fly   154 SEHRVDTNVIACNRLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSE 218
                        .:.:||.||||||||.:.||:|.:    .:.::.|     |::.||.|||..|
plant   436 ------------GKGLLLFGPPGTGKTMIGKAIAGE----AKATFFY-----ISASSLTSKWIGE 479

  Fly   219 SGKLVAQLFNKIAELVSDPNNLVCVLIDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDSLKT- 282
            ..|||..||.     |:.......:.:||::||...|.  |..|...:.|:....|.:::...:
plant   480 GEKLVRALFG-----VASCRQPAVIFVDEIDSLLSQRK--SDGEHESSRRLKTQFLIEMEGFDSG 537

  Fly   283 CPNVLILATSNLAQSIDLAFVDRADIRLFIGYPGISA----IREIYK--GM-------------L 328
            ...:|::..:|..|.:|.|...|...||:|..|...|    |:.:.|  |:             |
plant   538 SEQILLIGATNRPQELDEAARRRLTKRLYIPLPSSEARAWIIQNLLKKDGLFTLSDDDMNIICNL 602

  Fly   329 AELMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGRTLRKLPLLAHAQYTSSTLFELDQKISLS 393
            .|..|...::..|   :||..|.|.:..:|.:.::..|...:.|                 ::|.
plant   603 TEGYSGSDMKNLV---KDATMGPLREALKRGIDITNLTKDDMRL-----------------VTLQ 647

  Fly   394 DFLDAMLE 401
            ||.||:.|
plant   648 DFKDALQE 655

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	51/197 (26%)
AT3G27120	NP_001319654.1	P-loop containing Nucleoside Triphosphate Hydrolases	382..567	CDD:476819	59/257 (23%)
		AAA_lid_3	593..>628	CDD:465537	8/37 (22%)
		Vps4_C	<644..676	CDD:462762	6/12 (50%)