Protein Alignment pch2 and pex6

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: XP_001332652.6
• Gene: pex6 / 792998
• ZFINID: ZDB-GENE-081104-252
• Length: 1071
• Species: Danio rerio
• Alignment Length: 340
• Identity: 78/340 - (22%)
• Similarity: 151/340 - (44%)
• Gaps: 60/340 - (17%)

  Fly   102 SGEEGSDGIDSIVAA-SHAL----LPAAQFVGLWENLIYETGLKEKLLKFALSALMFSEHRVDTN 161
            :.|:.|..:|.:..| |.|:    :||..    |:    :.|..:::.|..|..:.......:..
Zfish   766 TSEDFSAALDVLQEAHSQAIGAPKIPAVS----WQ----DVGGLQQVKKEILDTIQLPLEHPELL 822

  Fly   162 VIACNRL-ILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQ 225
            .:...|. :||:||||||||.|.||:|.:.::.         .:.:....|.:.:..:|.:.:.|
Zfish   823 SLGLRRSGLLLYGPPGTGKTLLAKAVATECTMT---------FLSVKGPELINMYVGQSEENIRQ 878

  Fly   226 LFNKIAELVSDPNNLVCVL-IDEVESLAYARSAMSSNEPRDAM-RVVNAVLTQLDSLKTCPNVLI 288
            :|:|......      |:: .||::|||..|.  .|.:....| |||:.:|.:||.|.:..:|.:
Zfish   879 VFSKARSAAP------CIIFFDELDSLAPNRG--HSGDSGGVMDRVVSQLLAELDGLHSSGDVFV 935

  Fly   289 LATSNLAQSIDLAFV--DRADIRLFIGYPGISAIRE----IYKGMLAEL-MSAGVLQREVLESED 346
            :..:|....:|.:.:  .|.|..:::   ||:..||    :.|.:|.:. :.|.|...:::||
Zfish   936 IGATNRPDLLDQSLLRPGRFDKLVYV---GINEDRESQLQVLKAILRKFKVDASVCLSDIVES-- 995

  Fly   347 AEEGLLTQLAERSVGLSGRTLRKLPLLAHAQYTSSTLFE-LDQKIS-----LSDFLDAMLEALEQ 405
                    ...|..|....:|....::...:...|.:.| :|.::|     ..||.:| |..|:.
Zfish   996 --------CPPRLTGADLYSLCSDAMMCAVKRKISRITEGVDSELSSLTLCSEDFSEA-LSGLQP 1051

  Fly   406 HLGEQRLLKLESMEQ 420
            .:.||::.:.:.::|
Zfish  1052 SVSEQQISRYQLLQQ 1066

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	50/206 (24%)
pex6	XP_001332652.6	None