DRSC/TRiP Functional Genomics Resources

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Protein Alignment pch2 and SPATA5L1

DIOPT Version :9

Sequence 1:NP_001287235.1 Gene:pch2 / 41013 FlyBaseID:FBgn0051453 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_076968.2 Gene:SPATA5L1 / 79029 HGNCID:28762 Length:753 Species:Homo sapiens


Alignment Length:359 Identity:93/359 - (25%)
Similarity:146/359 - (40%) Gaps:83/359 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 EEGQLGLFSGEEGSDG--IDSI--VAASHALLPAA--QFVGL-------WENLIYETGLKEKLLK 145
            |.....|...|:..|.  ||.|  :.|...:.|::  ..:||       ||.:   .||::..||
Human   414 EAAMHALLHSEKNQDNPVIDEIDFLEAFKNIQPSSFRSVIGLMDIKPVDWEEI---GGLEDVKLK 475

  Fly   146 FALS---ALMFSEHRVDTNVIACNRLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEIN 207
            ...|   .|.|....|... :...:.:||:||||..||:|.:|||         :..:...|.::
Human   476 LKQSIEWPLKFPWEFVRMG-LTQPKGVLLYGPPGCAKTTLVRALA---------TSCHCSFVSVS 530

  Fly   208 SHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLVCVLIDEVESLAYARSAMSSNEPRDAM-RVVN 271
            ...|||.:..:|.|:::|:|.:..  .|.|   ..:.:||::|:..||||  |....|.. ||::
Human   531 GADLFSPFVGDSEKVLSQIFRQAR--ASTP---AILFLDEIDSILGARSA--SKTGCDVQERVLS 588

  Fly   272 AVLTQLD--SLKTCP-----------------NVLILATSNLAQSIDLAFV--DRADIRLFIGYP 315
            .:|.:||  .|||..                 :|:|:|.:|....:|.|.:  .|.|..::|..|
Human   589 VLLNELDGVGLKTIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPP 653

  Fly   316 GISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGRTLRKLPLLAHAQYTS 380
            .       :||.|:.|.   |..:.:....|..   |..||..:...||..||.|       .|.
Human   654 D-------HKGRLSILK---VCTKTMPIGPDVS---LENLAAETCFFSGADLRNL-------CTE 698

  Fly   381 STLFELDQKISLSDFLDAMLEALEQHLGEQRLLK 414
            :.|..|.:     :.|||.....|..|...:.:|
Human   699 AALLALQE-----NGLDATTVKQEHFLKSLKTVK 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pch2NP_001287235.1 AAA 166..315 CDD:214640 48/170 (28%)
AAA 169..314 CDD:278434 48/166 (29%)
SPATA5L1NP_076968.2 CDC48 22..746 CDD:273521 93/359 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..203
AAA 237..367 CDD:278434
AAA 501..651 CDD:278434 47/165 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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