Protein Alignment pch2 and afg2b

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001070056.2
• Gene: afg2b / 767648
• ZFINID: ZDB-GENE-060929-204
• Length: 748
• Species: Danio rerio
• Alignment Length: 361
• Identity: 93/361 - (25%)
• Similarity: 150/361 - (41%)
• Gaps: 75/361 - (20%)

  Fly    51 LPDLTAEQTEHVHSVLLERDNGGVQPLKVAETKFRFHFYATRPEEGQLGLFSGEEGSDGIDSIVA 115
            |.||:..:.| :..||:|:.|.|.|                     :.||.:.....| |.:|..
Zfish   132 LVDLSGVKAE-IRCVLVEKVNSGSQ---------------------RAGLITARTCVD-ISTIQT 173

  Fly   116 ASH-----ALLPAAQFVGLWENLIYETGLKEKL---LKFALSALMFSEHRVDTNVIACNRLILLH 172
            ..|     ..:.||...|: |::.  ..|||.:   |::..|.....        ::|.|.:||.
Zfish   174 VKHLDRQQQQVSAAPLGGM-EDVF--ASLKEMITFPLRYPGSLRQLG--------LSCPRGLLLI 227

  Fly   173 GPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSD- 236
            ||||.|||.|.:.:|:.:.         ..||.:|...:......||.:.:.::|.:..:...|
Zfish   228 GPPGVGKTLLVRCVAKDIG---------ATLVTVNGPEVTGSRPGESEENLRRVFEQARDAADDG 283

  Fly   237 PNNLVCV-LIDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDSLKTCPNVLILATSNLAQSIDL 300
            |    || ||||::||...|:. ||:.|.:  |:|..:||.:|::.:....:|:..:|...|:|.
Zfish   284 P----CVLLIDEIDSLCPRRTG-SSSAPEN--RLVAQLLTLMDAIGSHEGFVIIGATNQPDSLDP 341

  Fly   301 AF--VDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAERSVGLS 363
            |.  ..|.|..:.||.|.:...|.|.|          .:.||:..|.|.:   |..|||.:.|..
Zfish   342 ALRRPGRFDREVIIGVPSLLQRRSILK----------CVCREMPLSPDVD---LNTLAEMTCGYV 393

  Fly   364 GRTLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAM 399
            |..|..|...|..|....:.....:.:|:..|:.|:
Zfish   394 GADLSALSREAALQAMRHSQMGASEPVSMQHFMQAL 429

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	55/208 (26%)
afg2b	NP_001070056.2	CDC48	13..740	CDD:273521	93/361 (26%)