DRSC/TRiP Functional Genomics Resources

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Protein Alignment pch2 and Iqca1

DIOPT Version :10

Sequence 1:NP_524282.4 Gene:pch2 / 41013 FlyBaseID:FBgn0051453 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001355651.1 Gene:Iqca1 / 74918 MGIID:1922168 Length:838 Species:Mus musculus


Alignment Length:395 Identity:77/395 - (19%)
Similarity:151/395 - (38%) Gaps:107/395 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 DLTAEQT-EHVHSVLLERDNGG--VQPLKVAETKFRFHFYATRPEEGQLGLFSGEE---GSDGID 111
            ||||::| |.::..|:|:   |  :|.|||                 .|..:.||.   |:....
Mouse   497 DLTADRTIESLYQELVEK---GLLIQALKV-----------------NLSDYIGEYSYLGTTLRQ 541

  Fly   112 SIVAASHALLPAAQFVGLWENL------IYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLIL 170
            ..:....:||...|.:.|:..|      ::|   :..|:|                      .:|
Mouse   542 VAIEPMPSLLDVRQLITLYGILPLGSAEVHE---RAPLVK----------------------SLL 581

  Fly   171 LHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESG-KLVAQLFNKIAELV 234
            |.||.|.||..|..|:..:..         .:|..:::.::..|:..::| :::..|..|:|..:
Mouse   582 LAGPSGVGKKMLVHAICTETG---------ANLFNLSALNIAGKYPGKTGLQMMIHLVFKVARQL 637

  Fly   235 SDPNNLVCVLIDEVESLAYAR--SAMSSNEPRDAMRVVNAVLTQLDSLKTCPNVLILATSNLAQS 297
             .|:   .|.|.:.|...|.:  .|....||:...|.:..:   |..||....:||:.|::....
Mouse   638 -QPS---VVWIQDTEKTFYKKVPQAEKRFEPKRLKRYLPKL---LKLLKPDDRILIVGTTHRPFD 695

  Fly   298 IDLAFVDRADIR-LFIGYPGISAIREIYK-------GMLAELMSAGVLQREVLESEDAEEGLLTQ 354
            .:|....|...: :.:..|..::...::|       |.|...::...|.:   .::...:|.:.|
Mouse   696 AELQPFCRVYQKIILVPRPDYASRYVLWKEIILRNGGKLTNSLNISCLSK---VTDGFTQGQIVQ 757

  Fly   355 LAERSVGLSGRTLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAMLEALEQH---------LGEQ 410
            :.:..:     |.|:|...||...|:.      :.|::...::.:....|:.         ||::
Mouse   758 VIKDVL-----TERRLRQQAHKPLTAI------EFITMMTNMNPVYREEEESFKNWYAKTPLGKK 811

  Fly   411 RLLKL 415
            |:|.|
Mouse   812 RVLSL 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pch2NP_524282.4 RecA-like_Pch2-like 115..312 CDD:410916 40/206 (19%)
Iqca1NP_001355651.1 P-loop containing Nucleoside Triphosphate Hydrolases 552..711 CDD:476819 38/199 (19%)

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