DRSC/TRiP Functional Genomics Resources

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Protein Alignment pch2 and Fignl2

DIOPT Version :9

Sequence 1:NP_001287235.1 Gene:pch2 / 41013 FlyBaseID:FBgn0051453 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001201840.1 Gene:Fignl2 / 668225 MGIID:3646919 Length:644 Species:Mus musculus


Alignment Length:400 Identity:93/400 - (23%)
Similarity:143/400 - (35%) Gaps:105/400 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GNDLRSNAIRNNVETALKAYFQTARKLPR--NVSFLPDLTAEQTEHVHSVLLERDN--------- 71
            |..|:..|:....|...:.|.....|.|.  ..|: |  .|:.||.       |.|         
Mouse   257 GVSLKRKAVDEGAEARYRKYAYEPAKAPAADGASY-P--AADDTEC-------RGNGFRSKPPGA 311

  Fly    72 --------GGVQPLKVAETKFRFHFYATR-------PE-----EGQLGLFSGEEGSDGID--SIV 114
                    ||..||||..:.    .||.:       ||     .|.....|||. :.|:|  ::.
Mouse   312 TEDGTGKYGGGGPLKVLGSP----AYAPQLEPFDKFPERVPAAHGGFAEPSGEP-AKGVDPGALE 371

  Fly   115 AASHALL---PAAQFVGLWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIAC------NRLIL 170
            ..|..::   |..|    |.::..:..||..|.:..|..|:        ...||      .|.:|
Mouse   372 LVSSKMVDCGPPVQ----WADVAGQGALKAALEEELLWPLL--------RPPACPGSALPPRTVL 424

  Fly   171 LHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVS 235
            ..||.|.||..|.:.||.:|.         ..|:.:....|.:....|..:|:...|  .|....
Mouse   425 FFGPRGCGKALLGRCLATRLG---------ATLLRLRGAGLAASGAVEGARLLQAAF--AAARCR 478

  Fly   236 DPNNLVCVLIDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDSLKTC----PNVLILATSNLAQ 296
            .|   ..:||.|:::|..||.        |...:...:||.||.  :|    ..||::.|::...
Mouse   479 PP---AVLLISELDALLPARD--------DGASLRAPLLTCLDG--SCGARADGVLVVGTTSRPA 530

  Fly   297 SIDLAFVDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLE-------SEDAEEGLLTQ 354
            ::|.|...|..:|.::..|..:|..:|.:..||: ....:.:||:..       ....|.|.|.|
Mouse   531 ALDEATRRRFALRFYVALPDGAARGQILQRALAQ-QGCALNERELAALVQGTQGFSGGELGQLCQ 594

  Fly   355 LAERSVGLSG 364
            .|....|:||
Mouse   595 QAAAEAGISG 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pch2NP_001287235.1 AAA 166..315 CDD:214640 37/152 (24%)
AAA 169..314 CDD:278434 36/148 (24%)
Fignl2NP_001201840.1 SpoVK <381..638 CDD:223540 61/260 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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