Protein Alignment pch2 and fignl1

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001122223.1
• Gene: fignl1 / 569539
• ZFINID: ZDB-GENE-030131-1862
• Length: 661
• Species: Danio rerio
• Alignment Length: 449
• Identity: 103/449 - (22%)
• Similarity: 163/449 - (36%)
• Gaps: 153/449 - (34%)

  Fly    16 LRGNDLRSNAIRNNVETALKAYFQTARKLPRNVSFLPDLTAEQTEHVHSVLLERDNGGVQPLKVA 80
            |||..||.       |..:...|::||:     .|:.|   :|.:|.|
Zfish   275 LRGRGLRG-------EEGISTNFRSARE-----QFIVD---QQKKHSH----------------- 307

  Fly    81 ETKFRFHFYATRPEEGQLGLFSGEEGSDGIDSIVAASHALLPAAQFVGLWENLI-----YETGLK 140
                                 .|:.||.|  ::...:...|.|.:..|.....|     .|..||
Zfish   308 ---------------------QGQRGSPG--NVFTITKKCLGANRSRGASSKFISPMPRQEEDLK 349

  Fly   141 E------------------KLLKFALSALMFSEH----------------------------RVD 159
            :                  |:::..:|.:|  :|                            |.|
Zfish   350 DNTPKDMQPVDERLKNFEPKIIELIMSEIM--DHGPPVAWDDIAGLEFAKATIKEIVVWPMLRPD 412

  Fly   160 --TNVIACNRLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKL 222
              |.:....:.|||.||||||||.:.|.:|.:     .|:..::    |::.||.|||..|..|:
Zfish   413 IFTGLRGPPKGILLFGPPGTGKTLIGKCIACQ-----SGATFFS----ISASSLTSKWVGEGEKM 468

  Fly   223 VAQLFNKIAELVSDPNNLVCVLIDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDSLKTC--PN 285
            |..||     .::..:....:.|||::||.   |..:..|...:.|:....|.|||...|.  ..
Zfish   469 VRALF-----AIARCHQPAVIFIDEIDSLL---SQRTDGEHDSSRRIKTEFLVQLDGAATSAEDR 525

  Fly   286 VLILATSNLAQSIDLAFVDRADIRLFIGYPGISAIREIYKGMLA-ELMSAGVLQRE-VLESEDAE 348
            :|::..:|..|.||.|...|...||:|..|...|.|:|...::: |....||.:.| |::..:..
Zfish   526 ILVVGATNRPQEIDEAARRRLAKRLYIPLPEAEARRQIVTNLMSHEKSQLGVDEMEKVVQGTEGF 590

  Fly   349 EGL-LTQLAE-------RSVGLSGRTLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAM 399
            .|. :|||..       ||:.||.              .::.:.|..:.|..|||.:|:
Zfish   591 SGADMTQLCREAALGPIRSISLSD--------------IATIMAEQVRPILYSDFQEAL 635

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	61/251 (24%)
fignl1	NP_001122223.1	RecA-like_Figl-1	367..552	CDD:410933	54/203 (27%)
		AAA_lid_3	579..615	CDD:465537	10/49 (20%)
		Vps4_C	<610..658	CDD:462762	8/40 (20%)