Protein Alignment pch2 and nsfb

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001019625.3
• Gene: nsfb / 554200
• ZFINID: ZDB-GENE-050808-1
• Length: 747
• Species: Danio rerio
• Alignment Length: 348
• Identity: 82/348 - (23%)
• Similarity: 161/348 - (46%)
• Gaps: 59/348 - (16%)

  Fly    98 LGLFSGEEGSDGI-DSIVAASHALLPAAQFVGLWENLI-----YET----GLKEK---LLKFALS 149
            :||..|  .|..| :.:.::|..|:..|:..|..:::|     :|.    ||.::   :.:.|.:
Zfish   174 IGLLHG--NSQVIFEKVESSSVNLIGKAKTKGSRQSIINPDWNFERMGIGGLDKEFSDIFRRAFA 236

  Fly   150 ALMFSEHRVDTNVIACNRL--ILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLF 212
            :.:|....|:.  :.|..:  |||:||||.|||.:.:.:.:.|:.|..        ..:|...:.
Zfish   237 SRVFPPDIVEQ--MGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREP--------KVVNGPEIL 291

  Fly   213 SKWFSESGKLVAQLFNKIAE---LVSDPNNLVCVLIDEVESLAYARSAMS-SNEPRDAMRVVNAV 273
            :|:..||...:.:||....|   .:...:.|..::.||::::...|.:|: |....|.  |||.:
Zfish   292 NKYVGESEANIRKLFADAEEEQKRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT--VVNQL 354

  Fly   274 LTQLDSLKTCPNVLILATSNLAQSIDLAFV--DRADIRLFIGYPGISAIREIYKGMLAELMSAGV 336
            |:::|.::...|:|::..:|....||.|.:  .|.::::.||.|..:...:|.....|::..:.:
Zfish   355 LSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDETGRVQILNIHTAKMKQSNM 419

  Fly   337 LQREVLESEDAEEGLLTQLAERSVGLSGRTLRKLPLLAHAQYT-------SSTLFELDQ------ 388
            |.::|    |.:|     ||..:...||..|.  .|:..||.|       ::|..|:|.
Zfish   420 LAKDV----DVKE-----LAVETKNYSGAELE--GLVRAAQSTAMNRHIKATTQVEVDTEKAQTL 473

  Fly   389 KISLSDFLDAMLEALEQHLGEQR 411
            ::|.||||.::...::...|..:
Zfish   474 QVSRSDFLASLNNDIKPAFGSNQ 496

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	50/216 (23%)
nsfb	NP_001019625.3	None