DRSC/TRiP Functional Genomics Resources

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Protein Alignment pch2 and FIGNL2

DIOPT Version :10

Sequence 1:NP_524282.4 Gene:pch2 / 41013 FlyBaseID:FBgn0051453 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_016874787.1 Gene:FIGNL2 / 401720 HGNCID:13287 Length:767 Species:Homo sapiens


Alignment Length:346 Identity:85/346 - (24%)
Similarity:137/346 - (39%) Gaps:60/346 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 GGVQPLKV---------AETKFRFHFYATRPEEGQLGLFSGE--EGSD--GIDSIVAASHALLPA 123
            ||..||||         .|...:|...|..| .|...:.|||  :|.|  .::.:.:......|.
Human   439 GGGVPLKVLGSPVYGPQLEPFEKFPERAPAP-RGGFAVPSGETPKGVDPGALELVTSKMVDCGPP 502

  Fly   124 AQFVGLWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPPGTGKTSLCKALAQ 188
            .|:..:......:..|:|:|:...|....:      ...:...|.:||.||.|.||..|.:.||.
Human   503 VQWADVAGQGALKAALEEELVWPLLRPPAY------PGSLRPPRTVLLFGPRGAGKALLGRCLAT 561

  Fly   189 KLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLVCVLIDEVESLAY 253
            :|.         ..|:.:...:|.:...:|..:|:...|  .|.....|:.|   ||.|:|:|..
Human   562 QLG---------ATLLRLRGATLAAPGAAEGARLLQAAF--AAARCRPPSVL---LISELEALLP 612

  Fly   254 ARSAMSSNEPRDAMRVVNAVLTQLDSLKTC----PNVLILATSNLAQSIDLAFVDRADIRLFIGY 314
            ||.  .......|::|  .:|..||.  .|    ..||::.|::...::|.|...|..:|.::..
Human   613 ARD--DGAAAGGALQV--PLLACLDG--GCGAGADGVLVVGTTSRPAALDEATRRRFSLRFYVAL 671

  Fly   315 PGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGRTLRKLPLLAHAQYT 379
            |...|..:|.:..||: ....:.:||           |..|.:.:.|.||..|.:|...|.|   
Human   672 PDSPARGQILQRALAQ-QGCALSERE-----------LAALVQGTQGFSGGELGQLCQQAAA--- 721

  Fly   380 SSTLFELDQKISLSDFLDAML 400
            .:.|..|.:.:|..| |:|.|
Human   722 GAGLPGLQRPLSYKD-LEAAL 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pch2NP_524282.4 RecA-like_Pch2-like 115..312 CDD:410916 46/200 (23%)
FIGNL2XP_016874787.1 RecA-like_fidgetin 507..669 CDD:410931 44/187 (24%)
HflB <643..>720 CDD:440233 21/88 (24%)

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