Protein Alignment pch2 and trip13

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: XP_012819902.1
• Gene: trip13 / 394836
• XenbaseID: XB-GENE-974898
• Length: 440
• Species: Xenopus tropicalis
• Alignment Length: 373
• Identity: 176/373 - (47%)
• Similarity: 242/373 - (64%)
• Gaps: 35/373 - (9%)

  Fly    60 EHVHSV------LLERDNGGVQPLKVAETKFRFHFYATRPEEGQLGLFSGEEGSDGIDSIVAASH 118
            :::||:      |..:|.   ||:.:::.|...|.:... |:|.......||..|    :|||:|
 Frog    76 KNIHSISIADTELKLKDR---QPIDLSKCKVLIHIFQLN-EDGPCVESLEEENED----LVAANH 132

  Fly   119 ALLPAAQFVGLWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPPGTGKTSLC 183
            .|||||.|.|||::|||::.:|.:||.:..:|::||:..||:|:|:.||::||||||||||||||
 Frog   133 WLLPAADFHGLWDSLIYDSEIKSRLLDYIETAMLFSDKNVDSNLISWNRVVLLHGPPGTGKTSLC 197

  Fly   184 KALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLVCVLIDEV 248
            |||||||:||....|.|..|||||||||||||||||||||.::|.||.||::|...||.||||||
 Frog   198 KALAQKLTIRLSYRYRYGQLVEINSHSLFSKWFSESGKLVTKMFQKIHELINDKEALVFVLIDEV 262

  Fly   249 ESLAYARSA-MSSNEPRDAMRVVNAVLTQLDSLKTCPNVLILATSNLAQSIDLAFVDRADIRLFI 312
            |||..||.| .:..||.||:|||||||||:|.:|..|||:||:||||.:.||:||.|||||:.:|
 Frog   263 ESLTAARKASRAGTEPSDAIRVVNAVLTQIDHIKRYPNVVILSTSNLTEKIDVAFTDRADIKQYI 327

  Fly   313 GYPGISAIREIYKGMLAELMSAGVL--QREVLESEDAE------------EGLLTQLAERSVGLS 363
            |.|..:||.:||...:.|||...::  ::::|...|.|            ...|.:::.:|.|||
 Frog   328 GPPSPAAIFKIYLSCIEELMKCQIIYPKQQLLTLRDLEIIGFLENNISKLSLQLNEISRKSEGLS 392

  Fly   364 GRTLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAMLEALEQHLGEQR 411
            ||.|||||.||||.|..|      ..:::..||.|:..|:::...|::
 Frog   393 GRVLRKLPFLAHALYLQS------PTVTIERFLWALSLAVDEQFQERK 434

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	126/197 (64%)
trip13	XP_012819902.1	RecA-like_Pch2-like	129..327	CDD:410916	126/197 (64%)