Protein Alignment pch2 and trip13

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_956876.1
• Gene: trip13 / 393554
• ZFINID: ZDB-GENE-040426-1488
• Length: 424
• Species: Danio rerio
• Alignment Length: 424
• Identity: 194/424 - (45%)
• Similarity: 257/424 - (60%)
• Gaps: 41/424 - (9%)

  Fly    10 VHVEVCLRGNDLRSNAIRNNVETALKAYFQTARKLPRNVSFLPDLTAEQTEHVHSVLLERDNGGV 74
            ||:||.::.   :|.|.|::|.|.:.:.......:.|:..::.......|::|.||.:....|.
Zfish    18 VHIEVHVKS---QSTAKRSDVRTHVLSLLDRHSTVLRSFKWMDFDNEFLTKNVESVTIADVTGP- 78

  Fly    75 QPLKVAETKFR---FHFYATRPEE-GQLGLFSGEEGSDGIDSIVAASHALLPAAQFVGLWENLIY 135
               |:.:.|..   .|.:....:. ..|.|...||       :.||:..||||.:|.|:||:|||
Zfish    79 ---KLVDLKVHNLCIHIFTLNDDSPSTLNLEEEEE-------LSAANLWLLPAVEFHGVWESLIY 133

  Fly   136 ETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAY 200
            |.|:|.:||.:..:.:.||:..||:|:||.||::|||||||||||||||.||||||||....||:
Zfish   134 EEGIKTQLLDYVSTTIFFSDKNVDSNLIAWNRVVLLHGPPGTGKTSLCKGLAQKLSIRLSDRYAH 198

  Fly   201 THLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLVCVLIDEVESLAYARS-AMSSNEPR 264
            :..||||||||||||||||||||.::|.||.||:.|.:.||.|||||||||..||| |.:..||.
Zfish   199 SQFVEINSHSLFSKWFSESGKLVTKMFQKIQELIDDKDALVFVLIDEVESLTAARSAAQAGTEPS 263

  Fly   265 DAMRVVNAVLTQLDSLKTCPNVLILATSNLAQSIDLAFVDRADIRLFIGYPGISAIREIYKGMLA 329
            ||:||||:||||||.:|..|||:||.|||:.:.|||||||||||:.:||.|...||..||...|.
Zfish   264 DAIRVVNSVLTQLDQIKRHPNVVILTTSNVTEKIDLAFVDRADIKQYIGPPSAKAIFNIYLSSLE 328

  Fly   330 ELMSAGVL-------QREVLESEDAEEGLLTQL-------AERSVGLSGRTLRKLPLLAHAQY-T 379
            |||...::       ..|.||:.:..|..:|:|       ::||||||||.|||:|.||||.| .
Zfish   329 ELMKRQIIYPRQQLVSLEELETMNFMESDVTRLSLCLMNISQRSVGLSGRALRKIPFLAHALYGK 393

  Fly   380 SSTLFELDQKISLSDFLDAMLEALEQHLGEQRLL 413
            :||:       :|..||.||..|:.:...||..|
Zfish   394 TSTM-------TLKGFLTAMEHAVNKQRQEQASL 420

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	127/197 (64%)
trip13	NP_956876.1	RecA-like_Pch2-like	113..311	CDD:410916	127/197 (64%)