Protein Alignment pch2 and atad1a

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001004640.1
• Gene: atad1a / 368672
• ZFINID: ZDB-GENE-030616-593
• Length: 380
• Species: Danio rerio
• Alignment Length: 258
• Identity: 67/258 - (25%)
• Similarity: 115/258 - (44%)
• Gaps: 41/258 - (15%)

  Fly   169 ILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAEL 233
            :||:||||.|||.:.||.|:....|         .:.:.:.:|..||:.||.||.|.:|:...::
Zfish   132 VLLYGPPGCGKTLIAKATAKASGCR---------FINLQASTLTDKWYGESQKLTAAVFSLAVKI 187

  Fly   234 VSDPNNLVCVL-IDEVESLAYARSAMSSNEPRDAMRVVNAVLTQL-DSLKTCPN--VLILATSNL 294
              .|    |:: :||::|....||:|.    .:|..::.|....| |.|.|..|  |:::..:|.
Zfish   188 --QP----CIIFLDEIDSFLRNRSSMD----HEATAMMKAQFMSLWDGLDTGENSQVMVMGATNR 242

  Fly   295 AQSIDLAFVDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGL-LTQLAER 358
            .|.:|.|.:.|......:|.|..:...||.              |.:|..|:....: |.::|.:
Zfish   243 PQDVDAAILRRMPTAFHVGLPNAAQREEIL--------------RLILSGENLSNAINLKEIASQ 293

  Fly   359 SVGLSGRTLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAMLEALEQHLGEQRLLKLESMEQL 421
            |.|.||..|::|...| |.|.........|...::.  ...|:..|:|:..::|..:..::.|
Zfish   294 SEGYSGSDLKELCRDA-AMYRVRDYVRKQQMKQIAQ--QFQLDEEEEHVDSRQLRPVTQLDLL 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	43/146 (29%)
atad1a	NP_001004640.1	SpoVK	1..343	CDD:440232	65/246 (26%)
		RecA-like_ATAD1	95..260	CDD:410928	43/146 (29%)