DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment pch2 and Spata5

DIOPT Version :9

Sequence 1:	NP_001287235.1	Gene:	pch2 / 41013	FlyBaseID:	FBgn0051453	Length:	421	Species:	Drosophila melanogaster
Sequence 2:	XP_008759154.1	Gene:	Spata5 / 361935	RGDID:	1310478	Length:	893	Species:	Rattus norvegicus

Alignment Length:	258	Identity:	71/258 - (27%)
Similarity:	113/258 - (43%)	Gaps:	56/258 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   163 IACNRLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLF 227
            |...|.:||:||||||||.:.:|:|.::     |:|...    ||...:.||::.|:...:.|:|
  Rat   384 IPAPRGLLLYGPPGTGKTMIARAVANEV-----GAYVSV----INGPEIISKFYGETEARLRQIF 439

  Fly   228 NKIAELVSDPNNLVCVLIDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDSLKTCPN---VLIL 289
            .:..  :..|:   .:.|||:::|...|....|...:   |||.::||.:|.:.:..:   ||:|
  Rat   440 AEAT--LRHPS---IIFIDELDALCPKREGAQSEVEK---RVVASLLTLMDGIGSEGSEGRVLVL 496

  Fly   290 ATSNLAQSIDLAF--VDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLL 352
            ..:|..|::|.|.  ..|.|..:.||.|......:|.:.:|          |.|.......|  |
  Rat   497 GATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLL----------RRVPHLLTKAE--L 549

  Fly   353 TQLAERSVGLSG----------------RTLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAM 399
            .:||..:.|..|                |.|||.|.|..::.....      ||:|:|||..|
  Rat   550 LRLANNAHGYVGADLKALCNEAGLYALRRVLRKQPNLPDSKVAGMV------KITLNDFLQGM 606

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_001287235.1	AAA	166..315	CDD:214640	46/153 (30%)
pch2	NP_001287235.1	AAA	169..314	CDD:278434	44/149 (30%)
Spata5	XP_008759154.1	CDC48_N	64..132	CDD:304500
		SpoVK	370..882	CDD:223540	71/258 (28%)
		AAA	390..522	CDD:278434	43/148 (29%)
		AAA	664..796	CDD:278434
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0464
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900