Protein Alignment pch2 and TER94

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001097249.1
• Gene: TER94 / 36040
• FlyBaseID: FBgn0286784
• Length: 826
• Species: Drosophila melanogaster
• Alignment Length: 245
• Identity: 68/245 - (27%)
• Similarity: 107/245 - (43%)
• Gaps: 46/245 - (18%)

  Fly   129 LWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPPGTGKTSLCKALAQKLSIR 193
            |.|.:.|.....:|.|||.:..               :|.:|.:||||.|||.|.||:|.:
  Fly   511 LQELVQYPVEHPDKFLKFGMQP---------------SRGVLFYGPPGCGKTLLAKAIANE---- 556

  Fly   194 TQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLVCVL-IDEVESLAYARSA 257
                 ...:.:.:....|.:.||.||...|..:|:|......      ||| .||::|:|.||..
  Fly   557 -----CQANFISVKGPELLTMWFGESEANVRDIFDKARSAAP------CVLFFDELDSIAKARGG 610

  Fly   258 MSSNEPRDAMRVVNAVLTQLDSLKTCPNVLILATSNLAQSIDLAFV--DRADIRLFIGYPGISAI 320
            ...:....|.||:|.:||::|.:....||.|:..:|....||.|.:  .|.|..::|..|...:
  Fly   611 NVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKS- 674

  Fly   321 REIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAERSVGLSGRTLRKL 370
            ||            .:|:..:.:|..|:|..||.:|:.:.|.||..|.::
  Fly   675 RE------------AILKANLRKSPLAKEVDLTYIAKVTQGFSGADLTEI 712

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	53/185 (29%)
TER94	NP_001097249.1	CDC48	47..787	CDD:273521	68/245 (28%)