Protein Alignment pch2 and Atad1

DIOPT Version :9

• Sequence 1: NP_001287235.1
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_001030174.1
• Gene: Atad1 / 309532
• RGDID: 1308570
• Length: 361
• Species: Rattus norvegicus
• Alignment Length: 296
• Identity: 71/296 - (23%)
• Similarity: 131/296 - (44%)
• Gaps: 62/296 - (20%)

  Fly   109 GIDSIVAASHALLPAAQFVG------LWENLI----YETGLKEKLLKFALSALMFSEHRVDTNVI 163
            |:.::..:.:.:..||..|.      .|.::.    ..|.||:.::.......:|...|    ::
  Rat    63 GVKNVKLSEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSR----LL 123

  Fly   164 ACNRLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFN 228
            ...:.:||:||||.|||.:.||.|::...|         .:.:...:|..||:.||.||.|.:|:
  Rat   124 QPPKGVLLYGPPGCGKTLIAKATAKEAGCR---------FINLQPSTLTDKWYGESQKLAAAVFS 179

  Fly   229 KIAELVSDPNNLVCVLIDEVESLAYARSAMSSNEPRDAMRVVN--AVLTQLDSLKTCPNVLILAT 291
            ...:|  .|:   .:.|||::|  :.|:..||:....||....  ::...||:..:| .|:::..
  Rat   180 LAIKL--QPS---IIFIDEIDS--FLRNRSSSDHEATAMMKAQFMSLWDGLDTDHSC-QVIVMGA 236

  Fly   292 SNLAQSIDLAFVDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQRE-----VLESEDAEEGL 351
            :|..|.:|.|.:.|...|..|..|.:.                   |||     :|::|:.:..:
  Rat   237 TNRPQDLDSAIMRRMPTRFHINQPALK-------------------QREAILKLILKNENVDRHV 282

  Fly   352 -LTQLAERSVGLSGRTLRKL----PLLAHAQYTSST 382
             |.::|:.:.|.||..|:::    .||...:|.:||
  Rat   283 DLLEVAQETDGFSGSDLKEMCRDAALLCVREYVNST 318

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_001287235.1	AAA	166..315	CDD:214640	44/150 (29%)
		AAA	169..314	CDD:278434	44/146 (30%)
Atad1	NP_001030174.1	RecA-like_ATAD1	92..257	CDD:410928	48/185 (26%)
		AAA_lid_3	282..321	CDD:407720	11/37 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0464
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900