DRSC/TRiP Functional Genomics Resources

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Protein Alignment pch2 and ZK938.3

DIOPT Version :9

Sequence 1:NP_001287235.1 Gene:pch2 / 41013 FlyBaseID:FBgn0051453 Length:421 Species:Drosophila melanogaster
Sequence 2:NP_001364588.1 Gene:ZK938.3 / 191468 WormBaseID:WBGene00014160 Length:616 Species:Caenorhabditis elegans


Alignment Length:291 Identity:58/291 - (19%)
Similarity:95/291 - (32%) Gaps:109/291 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DLRSNAIRNNVETALKAYFQTARKLPRNV--SFLPDLTAEQTEHVHSVLLERDN-------GGV- 74
            |....|||  ::...:.||  ||||.|.:  ..|..|......::.....||:.       ||| 
 Worm   251 DATQAAIR--IQARTRGYF--ARKLVREMREKELNILNMTPESYIRKRCAERERKRKEGLAGGVG 311

  Fly    75 ----------------QPLKVAETKFRFHFYATRPEEGQLGLFSGEEGSDGIDSIVAASHALLPA 123
                            :.||:.:|.|   |:.|               ||..|        :.|:
 Worm   312 GGEIIEQIEEFNTDLAEALKLLKTHF---FFPT---------------SDLTD--------IKPS 350

  Fly   124 AQFVGL--WENLIYET---GLKEKLLKFALSALM----------------FSEHRVDTNVIACN- 166
            |..:.|  .|.:..:.   |:...|.:..||.|.                |....|.|....|: 
 Worm   351 ALPIDLNNQETIFRDACFRGIVSPLAQIELSELTSQREICKIENRQFKFDFRSFLVQTVCTPCSL 415

  Fly   167 -------------RLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSE 218
                         :.:||.|.|.:|||:..:|:::...:               :|...||....
 Worm   416 GTWQKQKSKDQKMQWLLLSGAPDSGKTTWARAISRACHV---------------THVHISKNVVN 465

  Fly   219 SGKLVAQLFNKIAELVSDPNNLVCVLIDEVE 249
            .||  .:::..:.:|......|: |.||.::
 Worm   466 MGK--RKIYTVVKKLAKQEKRLL-VSIDRID 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pch2NP_001287235.1 AAA 166..315 CDD:214640 18/98 (18%)
AAA 169..314 CDD:278434 18/81 (22%)
ZK938.3NP_001364588.1 P-loop_NTPase 431..545 CDD:422963 18/81 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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