Protein Alignment pch2 and pch-2

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: NP_495711.1
• Gene: pch-2 / 174313
• WormBaseID: WBGene00008641
• Length: 424
• Species: Caenorhabditis elegans
• Alignment Length: 447
• Identity: 164/447 - (36%)
• Similarity: 238/447 - (53%)
• Gaps: 71/447 - (15%)

  Fly     1 MSFLSNSDTVHVEVCLRGNDLRSNAIR--NNVETALKAYFQTAR--------KLPRNVSFLPDL- 54
            |..|.|   :|.|:.:.....:|...:  :..|..:||..:.||        :|.:..|.|.:|
 Worm     5 MKTLKN---IHAEIRICQKFPKSTVQKRFSEFEELIKAASKNARNWKPISSVELFQGDSSLNELF 66

  Fly    55 -----------TAEQTEHVHSVLLERDNGGVQPLKVAETKFRFHFYATRPEEGQLGLFSGEEGSD 108
                       ..|..|:|:.:.:...|              .|.|... ::|.|....|::  |
 Worm    67 EKLVIGTCELRDGELFENVNDLTINPSN--------------IHVYKLH-KDGPLSQNIGDD--D 114

  Fly   109 GIDSIVAASHALLPAAQFVGLWENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRLILLHG 173
            |.:||:.:....||..:|..:||||||::.||.:::.:..:....||..|:|.:|..||||||.|
 Worm   115 GDESIIGSQLWQLPCVEFDSIWENLIYDSNLKNEVMSYVAALARLSEKHVNTKIINVNRLILLTG 179

  Fly   174 PPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPN 238
            |||||||||||.|||.||||....|:.:.::|||||||||||||||||||.::|::|.||..|..
 Worm   180 PPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQKMFDQIDELAEDEK 244

  Fly   239 NLVCVLIDEVESLAYARSAMSS-NEPRDAMRVVNAVLTQLDSLKTCPNVLILATSNLAQSIDLAF 302
            .:|.|||||||||...|.:.|| :||.||:|.|||:|||:|.::...|||||.||||..::|.|.
 Worm   245 CMVFVLIDEVESLGMCRESSSSRSEPSDAIRAVNALLTQIDRIRRRDNVLILCTSNLESTLDKAL 309

  Fly   303 VDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESE-----------DAE------EG 350
            ||||||...:|.|...|...:.|..:.||...||    |:::|           |.:      ..
 Worm   310 VDRADIVKNVGQPSDFARYSMLKSSIMELARIGV----VIDNEVHTDYWPQDICDTKAPRNEFTE 370

  Fly   351 LLTQLAERSVGLSGRTLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAMLEALEQHL 407
            :|.::|:.:.|||||.:..||.|.:::....|       |:|.:.::..|||:::.|
 Worm   371 ILFKIAQEARGLSGRAISMLPTLVYSKSPEET-------ITLPNCMNLFLEAVKERL 420

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	108/197 (55%)
pch-2	NP_495711.1	McrB	13..>204	CDD:441011	65/207 (31%)
		RecA-like_Pch2-like	121..319	CDD:410916	108/197 (55%)