DRSC/TRiP Functional Genomics Resources

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Protein Alignment pch2 and LOC1280986

DIOPT Version :10

Sequence 1:NP_524282.4 Gene:pch2 / 41013 FlyBaseID:FBgn0051453 Length:421 Species:Drosophila melanogaster
Sequence 2:XP_320860.5 Gene:LOC1280986 / 1280986 VectorBaseID:AGAMI1_003191 Length:736 Species:Anopheles gambiae


Alignment Length:403 Identity:83/403 - (20%)
Similarity:148/403 - (36%) Gaps:110/403 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 LPRNVSFLPDLTAEQTEHVHSVLLERDNGGVQPLKVAETKFRFHFYATRP----EEGQLGLFSGE 104
            :.|..|....|..:..|...:|::......|:.:   :|:.|      ||    :|..||:.|.|
Mosquito   317 IARIASQFVSLVDQYRESAENVIIIGTTSSVESM---DTRLR------RPGRLDKEITLGIPSKE 372

  Fly   105 EGSDGIDSIVAASHALLP----------AAQFVG-----LWENLIYE------------------ 136
            :..|.:....|.:...|.          .|.:||     |:.||:.|                  
Mosquito   373 QRIDILRCFYATARGTLTDEQLDLVGQRTAGYVGAELELLYYNLVREMHKQQLPFEEALAEIQKK 437

  Fly   137 ---------TGL-----------------KEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPP 175
                     |||                 .:.||:..:...:.:..|.....|...|.|||:|||
Mosquito   438 HRPSNLRNATGLVGREATLSLDSFGGMDELKALLRLCIVEQLANPARFQRLGIHPLRGILLYGPP 502

  Fly   176 GTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNL 240
            |..||:|.|.||.:..:.         .:.:::..::|.:..::.||:.::||:     :..|..
Mosquito   503 GCAKTTLAKCLAAETGMT---------FLSLSAAQVYSPYVGDAEKLITRVFNE-----ARTNAP 553

  Fly   241 VCVLIDEVESLAYAR--SAMSSNEPRDAMRVVNAVLTQLDSL-----------KTCPNVLILATS 292
            ..|.:||::||...|  ..|........|.|::.:|.::|.:           :....|:::|.:
Mosquito   554 AVVFLDEIDSLVGNRGTGGMKGGSSAVNMGVLSTLLMEMDGIGQAEQAASALSEDAKRVVVIAAT 618

  Fly   293 NLAQSIDLAFVDRADIRLFIGYPGISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLAE 357
            |....:|.|.:....:...|..|....     ||.|.      :|::.......||:..|..:||
Mosquito   619 NRPDMVDDALLRPGRLTKLIHVPAPDG-----KGRLE------ILRKIATNVPFAEDVQLELVAE 672

  Fly   358 RSVGLSGRTLRKL 370
            ::...||..|:.|
Mosquito   673 QTERYSGADLQNL 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pch2NP_524282.4 RecA-like_Pch2-like 115..312 CDD:410916 52/268 (19%)
LOC1280986XP_320860.5 None

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