Protein Alignment pch2 and smid

DIOPT Version :10

• Sequence 1: NP_524282.4
• Gene: pch2 / 41013
• FlyBaseID: FBgn0051453
• Length: 421
• Species: Drosophila melanogaster
• Sequence 2: XP_061499817.1
• Gene: smid / 1276867
• VectorBaseID: AGAMI1_004681
• Length: 1089
• Species: Anopheles gambiae
• Alignment Length: 304
• Identity: 75/304 - (24%)
• Similarity: 129/304 - (42%)
• Gaps: 62/304 - (20%)

  Fly   111 DSIVAASHALLPAAQFVGL-------WENLIYETGLKEKLLKFALSALMFSEHRVDTNVIACNRL 168
            |..:.|...:.|:|:..|.       |.::.....::|: ||.|:.|.:...||:....:.....
Mosquito   774 DDFIEALKTVQPSAKREGFITVPDVTWNDIGSLGDIREE-LKLAILAPVKFPHRLKLLGLTAPSG 837

  Fly   169 ILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHSLFSKWFSESGKLVAQLFNKIAEL 233
            :||.||||.|||.|.||:|.:..|         :.:.:....|.:.:..||.:.|.|.|.:..
Mosquito   838 VLLCGPPGCGKTLLAKAVANEAGI---------NFISVKGPELLNMYVGESERAVRQCFQRAR-- 891

  Fly   234 VSDPNNLVCVL-IDEVESLAYARSAMSSNEPRDAMRVVNAVLTQLDSLKTCPNVLILATSNLAQS 297
                |:..||: .||.:||...||  .:.|.....||||.:||::|.::....|.::|.:|....
Mosquito   892 ----NSAPCVIFFDEFDSLCPKRS--DTAEGSAGTRVVNQLLTEMDGIEERKGVFLMAATNRPDI 950

  Fly   298 IDLAFV--DRADIRLFIGYPG----ISAIREIYKGMLAELMSAGVLQREVLESEDAEEGLLTQLA 356
            :|.|.:  .|.|..|::|.|.    :..:|.:.|......:           ::|.|   |.::|
Mosquito   951 VDPAVLRPGRLDKILYVGLPAKEDRVDILRALTKNRTQPRL-----------ADDVE---LEKVA 1001

  Fly   357 ERSVGLSGRTLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAML 400
            |.:.|                ||.:.|..|.::.||....|:::
Mosquito  1002 ELTEG----------------YTGADLAGLVRQASLQTLKDSIV 1029

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pch2	NP_524282.4	RecA-like_Pch2-like	115..312	CDD:410916	57/206 (28%)
smid	XP_061499817.1	None