DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or85c and Or42a

DIOPT Version :10

Sequence 1:NP_524280.2 Gene:Or85c / 41008 FlyBaseID:FBgn0037591 Length:389 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:386 Identity:81/386 - (20%)
Similarity:165/386 - (42%) Gaps:67/386 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LWSHLLFWANVINLSV-IVFGEILYLGVAYSDGKFIDAVTVLSYIGFVIVGMSKMFFIWW---KK 90
            |||..|.:.:.....: .:.|.|.:|. .:|.|:|:.::.|    .|.....|....|.|   |:
  Fly    50 LWSFALNFCSTFYQPIGFLTGYISHLS-EFSPGEFLTSLQV----AFNAWSCSTKVLIVWALVKR 109

  Fly    91 TD-LSDLVKELE-HIYPNGKAEEEMYRLDRYLRSCSRISITYALLYSVLIWTFNLFSIMQFLVYE 153
            .| .::|:.|:: .|...|    |..::.|.:...:||...:..:|  :::..|.|         
  Fly   110 FDEANNLLDEMDRRITDPG----ERLQIHRAVSLSNRIFFFFMAVY--MVYATNTF--------- 159

  Fly   154 KLLKIRVVGQTLPYLMYFPW-NWHENWTYYVLLFCQNFAGHTSASGQISTDLLLCAVATQVVM-- 215
              |....:|:. ||..|:|: :|..:..:..|   |....:.:.:|....|:.:.......|:  
  Fly   160 --LSAIFIGRP-PYQNYYPFLDWRSSTLHLAL---QAGLEYFAMAGACFQDVCVDCYPVNFVLVL 218

  Fly   216 --HFDYLARVVEKQVLDRDWSENSRF--LAKTVQYHQRILRLMDVLNDIFGIPLLLNFMVSTFVI 276
              |....|..:.:.......|:..::  |.:.:|.|:.|||.:|.|..:....:.:.|:|...|:
  Fly   219 RAHMSIFAERLRRLGTYPYESQEQKYERLVQCIQDHKVILRFVDCLRPVISGTIFVQFLVVGLVL 283

  Fly   277 CFVGFQMTVGVPPDIMIKLFLFLFSSLSQV-------------YLICHYGQLIADASSSLSISAY 328
               ||.:       |.|.||..|.|:::.:             .::|:|   :.:....|:.:.:
  Fly   284 ---GFTL-------INIVLFANLGSAIAALSFMAAVLLETTPFCILCNY---LTEDCYKLADALF 335

  Fly   329 KQNWQNADIRYRRALVFFIARPQR-TTYLKATIFMNITRATMTDLLQVSYKFFALLRTMYI 388
            :.||.:.:.||::.|::|:.:.|: .|::...:| .|:..|...:.:.|:..|.|::.|.|
  Fly   336 QSNWIDEEKRYQKTLMYFLQKLQQPITFMAMNVF-PISVGTNISVTKFSFSVFTLVKQMNI 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or85cNP_524280.2 7tm_6 63..377 CDD:251636 67/339 (20%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 69/343 (20%)

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