DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or85b and Or1a

DIOPT Version :10

Sequence 1:NP_524279.2 Gene:Or85b / 41007 FlyBaseID:FBgn0037590 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:170 Identity:35/170 - (20%)
Similarity:64/170 - (37%) Gaps:54/170 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   248 HERILRLSDAVNDIFGIPLLLNFMVSSF------------VIC------------FVGFQMTVGV 288
            |.|:|::....|        .:||..:|            |||            |:||      
  Fly   246 HARLLKIVQHFN--------YSFMEIAFVEVVIICGLYCSVICQYIMPHTNQNFAFLGF------ 296

  Fly   289 PPDIVVKLFLFLVSSMSQVYLICHYG--QLVADASYGFSVATYNQ-KWYKADVRYKRALVIIIAR 350
                    |..:|::...:||   :|  |:..:|. .||...|.. .|.....::::..:..|.|
  Fly   297 --------FSLVVTTQLCIYL---FGAEQVRLEAE-RFSRLLYEVIPWQNLPPKHRKLFLFPIER 349

  Fly   351 SQKVTFLKATIFLDITRSTMTDLLQISYKFFALLRTMYTQ 390
            :|:.|.|.| .|.::.|..:..:.:.:..|..|:..:|.:
  Fly   350 AQRETVLGA-YFFELGRPLLVWIFRTAGSFTTLMNALYAK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or85bNP_524279.2 7tm_6 64..378 CDD:251636 32/156 (21%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 32/156 (21%)

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