DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7963 and CG17359

DIOPT Version :9

Sequence 1:NP_649798.3 Gene:CG7963 / 41001 FlyBaseID:FBgn0037584 Length:354 Species:Drosophila melanogaster
Sequence 2:NP_648679.1 Gene:CG17359 / 39549 FlyBaseID:FBgn0036396 Length:339 Species:Drosophila melanogaster


Alignment Length:358 Identity:100/358 - (27%)
Similarity:159/358 - (44%) Gaps:52/358 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 CRVCLKQDELLVDIY-------EIVEEMQVDLCTLLETCGGIKVDRRDVQPMYLCQECTNELLIA 67
            ||||..:.:.|:|||       ..|:|.:..|.|:|..|.|..|.:.|..|.::|.||...:..|
  Fly     7 CRVCRDESDCLLDIYTEPYASSNRVQEQEPVLATMLRECSGCSVHKEDGMPQFICVECAEAVRNA 71

  Fly    68 AKFRKICVES----EKLRDMAPEI-NIDTAEPLASEEIIIIDPSDYIEQLSAVEDPE-NEPIGVS 126
            .:.|:.|.:|    |:||.|..|: :|:....:...    |:|...:..:.|.:.|| :||:.| 
  Fly    72 YRLRRQCRKSHQYFEQLRLMMKELDDIEYCLNIGDN----IEPQMPVSVMEAGKTPETSEPLLV- 131

  Fly   127 RWNCQHCGAGFQLSEVLRRHIQEVHASITIIDCRERRRIFTKLGCYQVHNCSYAKTPKRGHKCLE 191
                       :|.:|.....:....|..:.|..|.:         ...:.|.||||....|...
  Fly   132 -----------ELVQVKYMPPEPKPISSPLPDNNEHK---------LAQSYSPAKTPHNKSKRRA 176

  Fly   192 CGKCLQSASSLASHIRLHTDEWPFTCDQCAKAFRTNGALEVHQRRHKQVLQHKCLHCGRGFVESS 256
            .......:.|..|.:....|:..:...:..|..|..|             .::|..|.:.|.:..
  Fly   177 RSYSDNDSWSPDSELEHEDDDKIWNASKRGKPKRVPG-------------PYRCKLCTQSFTQKQ 228

  Fly   257 NLRRHIVNRHTEERPHLCNVYQRSFSRVYMLELHLRTNTGERPYACQHRDKRFAQLGVLKIHERI 321
            ||..| :..||.|||:.|::..|||::...|:.|.|.:|||||:.|.:..|||.|:|.|::|.|.
  Fly   229 NLEIH-MRIHTGERPYKCSLCPRSFAQKGNLQSHTRCHTGERPFGCPNCPKRFRQVGQLQVHTRT 292

  Fly   322 HTGERLHRCQVCEKPFTRAGQLRKHALRHETGQ 354
            ||||:..:|..|::.|.:...|:||...|..|:
  Fly   293 HTGEQPFKCSKCQQSFKQLNGLQKHMSAHTRGK 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7963NP_649798.3 zf-AD 10..80 CDD:285071 26/80 (33%)
C2H2 Zn finger 159..179 CDD:275368 1/19 (5%)
COG5048 184..>250 CDD:227381 9/65 (14%)
C2H2 Zn finger 189..209 CDD:275368 2/19 (11%)
C2H2 Zn finger 217..237 CDD:275368 3/19 (16%)
C2H2 Zn finger 245..262 CDD:275368 5/16 (31%)
C2H2 Zn finger 274..294 CDD:275368 7/19 (37%)
C2H2 Zn finger 302..322 CDD:275368 9/19 (47%)
zf-H2C2_2 315..339 CDD:290200 10/23 (43%)
C2H2 Zn finger 330..350 CDD:275368 6/19 (32%)
CG17359NP_648679.1 zf-AD 6..88 CDD:285071 26/80 (33%)
zf-C2H2 215..237 CDD:278523 6/22 (27%)
C2H2 Zn finger 217..237 CDD:275368 6/20 (30%)
zf-H2C2_2 229..254 CDD:290200 12/25 (48%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 9/19 (47%)
zf-H2C2_2 286..310 CDD:290200 10/23 (43%)
C2H2 Zn finger 301..321 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.