DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9684 and smyd3

DIOPT Version :9

Sequence 1:NP_649797.2 Gene:CG9684 / 41000 FlyBaseID:FBgn0037583 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_001032477.1 Gene:smyd3 / 569507 ZFINID:ZDB-GENE-051120-138 Length:380 Species:Danio rerio


Alignment Length:139 Identity:31/139 - (22%)
Similarity:49/139 - (35%) Gaps:48/139 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KGKCVHCANAAERV--CQRCGDF-YCSKHCQRQDWLRHRYIC---------IPLPA--------- 60
            |..|..|....|.:  |.:|... ||:..||:|.|..|:..|         ||..:         
Zfish    46 KTACQSCLKRGESLSRCSQCKTARYCNVQCQKQAWPDHKRECKCLKHLQPRIPTDSVRLVARIIF 110

  Fly    61 -LVSPNE------YSV---------FQSDRESTLEGACSL--------NADKSVVEASPIPLSRS 101
             |:|.:|      ||:         ...::...|:..|:.        |.|.|.:.:...|:|  
Zfish   111 KLLSQSESDQEELYSIAEHQSHLADMSEEKTEGLKHLCTTLQVYLAEENCDLSRLPSGLDPVS-- 173

  Fly   102 PILPDLQCN 110
             :|..:.||
Zfish   174 -LLARVTCN 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9684NP_649797.2 zf-MYND 20..55 CDD:280009 12/37 (32%)
TUDOR 132..250 CDD:278965
TUDOR 527..574 CDD:119391
smyd3NP_001032477.1 zf-MYND 49..87 CDD:280009 12/37 (32%)
SET <201..239 CDD:279228
TPR_12 276..351 CDD:290160
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
10.960

Return to query results.
Submit another query.