DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9684 and smyd1b

DIOPT Version :9

Sequence 1:NP_649797.2 Gene:CG9684 / 41000 FlyBaseID:FBgn0037583 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_001034725.1 Gene:smyd1b / 569027 ZFINID:ZDB-GENE-060522-1 Length:486 Species:Danio rerio


Alignment Length:519 Identity:107/519 - (20%)
Similarity:171/519 - (32%) Gaps:133/519 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AQAKGKCVHCANAAERVCQRCGDF----YCSKHCQRQDWLRHRYICIPLPALVSPNEYSVFQSDR 74
            :||...|..|....|:: ||||..    ||.|.|||..|..|:..|..:.....|...:|     
Zfish    41 SQASSICHSCFRRQEKL-QRCGQCRFAQYCDKTCQRAGWEEHKLECAAIKTYGKPPSENV----- 99

  Fly    75 ESTLEGACSLNADKSVVEASPIPLSRSPILPDLQCNNAGRSSIIAAKDDIP-------------- 125
              .|........||.....|...|:....|.|..|:        .::||:.              
Zfish   100 --RLAARILWRMDKQGSVVSDNQLTTLEDLEDHICD--------ISEDDLKDFKVDIHNFLDYWP 154

  Fly   126 -VSPPKAIIPPSGAMVYITDFISSNRCYIRDASESAERAFDEVCKKVNTIATLLPRIKNPPPNRL 189
             .|.|..:    .::.:|...|:.|...:.|     :|....|.      ..|.|        .|
Zfish   155 RNSKPHTV----DSVSHILGVINCNGFMVSD-----QRGLQAVG------VGLFP--------NL 196

  Fly   190 CLVHFNGMYVRAKMCKKLREVSHLFLVDLGIKHSGPFFDFKDINDELKALPCSSQLVQLKNVLNC 254
            |||:.:..    ..|..:....:...:|. :.||.     |.|  ||:||...|...:: .|...
Zfish   197 CLVNHDCW----PNCTVILNNGNQSAIDT-VFHSQ-----KRI--ELRALGKISAGEEV-TVAYV 248

  Fly   255 DYSNDVIAFNSKFVGKKYMATIKKCPGLHLVELVNTEMNFS---------VNEQLNAF--FNSKK 308
            ||.| |.|...:.:.::|..   .|...|..|.:..::..:         ..||:...  |:.:|
Zfish   249 DYLN-VSADRQRLLKQQYFF---DCTCKHCTEKIKDDLKMAGAEVDGVKVPEEQVKEVTEFSRQK 309

  Fly   309 LLR--------NPNSAAENIKSCSLEGPQPSHIDQPIAIPAIEC--KKMLTKPEVQNECEEILKQ 363
            |.:        |.|...:..:.| :|..:....|..|....:.|  .::|:..:..:|..|..::
Zfish   310 LEKMEKARIEANYNEVVKICREC-VEKQENVLADTHIYYLRVCCTLSEVLSYLQFFDEASEYARK 373

  Fly   364 QNSGQIDQSKSTN-----VLVTEGASNKMLGFIDLAD----KATK----TDQDTAPKPKDEDVKH 415
            ...|.:......|     ..:..|.::...|||::|.    ||..    |...|.|..||.:...
Zfish   374 MVDGYLKLYHPNNAQLGMATMRAGVTHWQAGFIEVAHGMICKAFAILMITHGPTHPITKDLEAMR 438

  Fly   416 SLTQCLTPKANYPLQLPNHKKNLELPVIHKTNAQTNGIVMSKNEHVLKPPFEMRRFSIESKEGI 479
            ..|:                  :||.:..    |...:..|..|..||.. .||..:..:.|||
Zfish   439 MQTE------------------MELRMFQ----QNEYVYHSMREAALKNQ-PMRMMAEPTNEGI 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9684NP_649797.2 zf-MYND 20..55 CDD:280009 15/38 (39%)
TUDOR 132..250 CDD:278965 23/117 (20%)
TUDOR 527..574 CDD:119391
smyd1bNP_001034725.1 zf-MYND 47..85 CDD:280009 15/38 (39%)
SET <173..247 CDD:214614 22/105 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
10.960

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