DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9684 and Smyd2

DIOPT Version :9

Sequence 1:NP_649797.2 Gene:CG9684 / 41000 FlyBaseID:FBgn0037583 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_996733.1 Gene:Smyd2 / 289372 RGDID:727785 Length:433 Species:Rattus norvegicus


Alignment Length:338 Identity:60/338 - (17%)
Similarity:111/338 - (32%) Gaps:98/338 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KGKCVHCANAAERVCQRCG----DFYCSKHCQRQDWLRHRYIC---------------IPLPALV 62
            :|....|..|.:....:||    .|||...||::||..|:..|               :.|.|.:
  Rat    48 RGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVVFGENWNPSETVRLTARI 112

  Fly    63 ----------SPNEYSVFQSDRESTLEGACSLNADKSVVEASPIPLSRSPILPDLQCNNAGRSSI 117
                      :|:|..:...:.||.|:   .|:.:|..:..|.|..........|:         
  Rat   113 LAKQKMHPERTPSEKLLAVREFESHLD---KLDNEKKDLIQSDIAALHQFYSKHLE--------- 165

  Fly   118 IAAKDDIPVSPPKAIIPPSGAMVYITDFISSNRCYIRD--ASESAERAFDEVCKKVNTIATLLPR 180
                           .|...::|.:...::.|...|.|  .|......|.:|....::..     
  Rat   166 ---------------FPDHSSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCC----- 210

  Fly   181 IKNPPPNRLCLVHFNGMYVRAKMCKKLREVSHLF--LVDLGIKHSGPFFDFKDINDELK------ 237
                 ||  .:|.:.|.....:..:::.....:|  .:||       .:..:|.||.|:      
  Rat   211 -----PN--VIVTYKGTLAEVRAVQEIHPGDEVFTSYIDL-------LYPTEDRNDRLRDSYFFT 261

  Fly   238 --ALPCSS--------QLVQLKNVLNCDYSNDVIAFNSKFVGKKYMATIKKCPG--LHLVELVNT 290
              ...|::        ::.:|.|....:...|::.:....:.:...|...|.|.  |.:.||...
  Rat   262 CECRECTTKDKDKAKVEIRKLSNPPQAEAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQE 326

  Fly   291 EMNFSVNEQLNAF 303
            :|: ||.|..|.:
  Rat   327 KMS-SVFEDSNVY 338

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG9684NP_649797.2 zf-MYND 20..55 CDD:280009 12/38 (32%)
TUDOR 132..250 CDD:278965 21/137 (15%)
TUDOR 527..574 CDD:119391
Smyd2NP_996733.1 SET_SMYD2 7..269 CDD:380979 46/266 (17%)
S-adenosyl-L-methionine binding. /evidence=ECO:0000250 17..19
zf-MYND 52..90 CDD:396356 12/37 (32%)
Peptide substrate binding. /evidence=ECO:0000250 183..185 0/1 (0%)