DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ARSA and Sgsh

DIOPT Version :9

Sequence 1:XP_016884289.1 Gene:ARSA / 410 HGNCID:713 Length:547 Species:Homo sapiens
Sequence 2:NP_650760.1 Gene:Sgsh / 42266 FlyBaseID:FBgn0038660 Length:524 Species:Drosophila melanogaster


Alignment Length:542 Identity:141/542 - (26%)
Similarity:201/542 - (37%) Gaps:172/542 - (31%)


- Green bases have known domain annotations that are detailed below.


Human    11 LALAAGLAVARPPNIVLIFADDLGYGDLGCYGHPSSTTPNLDQLAAGGLRFTDFYVPVSLCTPSR 75
            |.|.||.: |.|.|::|:.|||.|: :.|.|.:....|||||.||..||.|.:.:..||.|:|||
  Fly    10 LWLIAGCS-AGPQNVLLLLADDAGF-ESGAYLNKFCQTPNLDALAKRGLLFNNAFTSVSSCSPSR 72

Human    76 AALLTGRLPVRMGMY---PGV----LVPSSRGGLP--LEEVTVAEVLAARGYLTGMAGKWHLGVG 131
            :.||||:.....|||   .||    ::|.: |.||  :.:.:...:      |:|:.||.|:|..
  Fly    73 SQLLTGQAGHSSGMYGLHQGVHNFNVLPDT-GSLPNLIRDQSGGRI------LSGIIGKKHVGAA 130

Human   132 PEGAFLPPHQGFHRFLGIPYSHDQGPC-QNLTCFPPATPCDGGCDQGLVPIPLLANLSVEAQPPW 195
            ....|        .|......|..... :|:|                                 
  Fly   131 NNFRF--------DFEQTEEQHSINQIGRNIT--------------------------------- 154

Human   196 LPGLEARYMAFAHDLMADAQRQDRPFFLYYASHHTH-----YPQFSGQSFAERSGRGPFG----- 250
                  |...:|...:..|:.:.:||||....|..|     .|||.  .|.||.|.|..|     
  Fly   155 ------RMKEYARQFLKQAKDEKKPFFLMVGFHDPHRCGHITPQFG--EFCERWGSGEEGMGSIP 211

Human   251 --------------------------------DSLMELDAAVGTLMTAIGDLGLLEETLVIFTAD 283
                                            .::..||..||.::..:...|:.::||||:|:|
  Fly   212 DWKPIYYDWRNLDVPAWLPDTDVVRQELAAQYMTISRLDQGVGLMLKELEAAGVADQTLVIYTSD 276

Human   284 NGPETMRMSRGGCSGLLRCGKGTTYEGGVREPALAFWPG-----HIAPGVTHELASSLDLLPTLA 343
            |||.    ..||.:.|        ||.|:|.|.:...|.     |.|   |..:.|.||:.|::.
  Fly   277 NGPP----FPGGRTNL--------YEHGIRSPLIISSPNKEDRHHEA---TAAMVSLLDIYPSVM 326

Human   344 ALAGAPLPNVT-LDGFDLSPLLLGTGKSP----RQSLFFYPSYPDEVRGVF---AVRTGKYK-AH 399
            .....|.||.| :.|..:.|:|   .:.|    ..|:|...|| .||...:   .||..:|| .|
  Fly   327 DALQIPRPNDTKIVGRSILPVL---REEPPIKESDSVFGSHSY-HEVTMAYPMRMVRNRRYKLIH 387

Human   400 FFTQGNPSPWIPPP---DLLTPPRSPRSLAPPLALALCTELAPSPGSAHSDTTADPACHASSSLT 461
                 |.:.|...|   |..|.|    :....|...|..:..|               ...|.|.
  Fly   388 -----NINYWADFPIDQDFYTSP----TFQQILNATLRKQTLP---------------WYRSLLQ 428

Human   462 AHEPP--LLYDLSKDPGENYNL 481
            .::.|  .|||:..||.|.:||
  Fly   429 YYQRPEWELYDIKTDPLERFNL 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARSAXP_016884289.1 None
SgshNP_650760.1 AslA 17..476 CDD:225661 137/535 (26%)
SGSH 22..471 CDD:293751 135/529 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3119
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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