DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and LPXN

DIOPT Version :10

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001137467.1 Gene:LPXN / 9404 HGNCID:14061 Length:391 Species:Homo sapiens


Alignment Length:316 Identity:89/316 - (28%)
Similarity:127/316 - (40%) Gaps:87/316 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 HCTRCADGFEP-TEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYEFEGRKYCERDFHVLFAPCCN 83
            ||..|.   :| ..|::::.|:.||.:.|||..|........|:|..|..||..|:|.||:|.|.
Human   156 HCASCQ---KPIAGKVIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSPRCA 217

  Fly    84 KCGEFVIGRVIKAMSASWHPQCFRCQLCAKELADCGFIKNQNRALCHECNAKVKAEITGRYVCQK 148
            .|...::.:|:.||:.:|||:.|.|..|                                     
Human   218 YCAAPILDKVLTAMNQTWHPEHFFCSHC------------------------------------- 245

  Fly   149 CHGLIDEEPLRFRGEVY--HGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGI 211
                         |||:  .|:|               |...:|          ||.:....|..
Human   246 -------------GEVFGAEGFH---------------EKDKKP----------YCRKDFLAMFS 272

  Fly   212 PICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVC 276
            |.||.|.||:.|..::|:...||.|.|||..|...|.....:|..|..:||.|||...|.||..|
Human   273 PKCGGCNRPVLENYLSAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTLCHGC 337

  Fly   277 NQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSK--FYEYDEKPVCKKCYDR-FP 329
            .|.|.|...:|:...:...||.|:.|   :||.||  |.|.::|..|:.|::: ||
Human   338 GQPITGRCISAMGYKFHPEHFVCAFC---LTQLSKGIFREQNDKTYCQPCFNKLFP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717 19/58 (33%)
LIM2_PINCH 82..133 CDD:188718 11/50 (22%)
LIM3_PINCH 146..206 CDD:188719 9/61 (15%)
LIM4_PINCH 212..265 CDD:188720 20/52 (38%)
LIM5_PINCH 273..326 CDD:188721 19/54 (35%)
LPXNNP_001137467.1 LIM1_Leupaxin 155..209 CDD:188790 18/55 (33%)
LIM2_Leupaxin 216..267 CDD:188792 20/125 (16%)
LIM3_Leupaxin 275..327 CDD:188794 20/51 (39%)
LIM4_Paxillin_like 334..385 CDD:188725 18/53 (34%)

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