DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment stck and PLIM2b

DIOPT Version :9

Sequence 1:	NP_731242.1	Gene:	stck / 40999	FlyBaseID:	FBgn0020249	Length:	348	Species:	Drosophila melanogaster
Sequence 2:	NP_171683.1	Gene:	PLIM2b / 839267	AraportID:	AT1G01780	Length:	205	Species:	Arabidopsis thaliana

Alignment Length:	206	Identity:	51/206 - (24%)
Similarity:	75/206 - (36%)	Gaps:	58/206 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    82 CNKCGEFVIGRVIKAMSAS---WHPQCFRCQLCAKELADCGFIKNQNRALCHECNAKVKAEITGR 143
            ||.|.:.|.  |:..:|..   :|..||||..|.      |.::..|           .:.:.|.
plant    10 CNVCDKTVY--VVDMLSIEGMPYHKSCFRCTHCK------GTLQMSN-----------YSSMDGV 55

  Fly   144 YVCQKCHGLIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDK 208
            ..| |.|   .|:..:..|.....:....|. ..||..|..::.|           ::| ...||
plant    56 LYC-KTH---FEQLFKESGNFSKNFQPGKTE-KPELTRTPSKISS-----------IFC-GTQDK 103

  Fly   209 MGIPICGACRR---PIEERVVTALGKHWHVEHFVCAK--CEKPFLGHRHYEK-RGLAYCETHYHQ 267
                 |.||.:   |:|:  :...|:.:|...|.||.  |.   |.|..|.. ..:.||..|::|
plant   104 -----CAACEKTVYPLEK--IQMEGECFHKTCFRCAHGGCT---LTHSSYASLDSVLYCRHHFNQ 158

  Fly   268 LF---GNLCFV 275
            ||   ||...|
plant   159 LFMEKGNYAHV 169

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
stck	NP_731242.1	LIM1_PINCH	21..79	CDD:188717
		LIM2_PINCH	82..133	CDD:188718	14/53 (26%)
		LIM3_PINCH	146..206	CDD:188719	11/59 (19%)
		LIM4_PINCH	212..265	CDD:188720	16/58 (28%)
		LIM5_PINCH	273..326	CDD:188721	1/3 (33%)
PLIM2b	NP_171683.1	LIM1_SF3	6..68	CDD:188824	19/80 (24%)
PLIM2b	NP_171683.1	LIM	104..164	CDD:413332	20/64 (31%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	56	1.000	Inparanoid score	I2587
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.050