DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and Pdlim7

DIOPT Version :10

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001107560.1 Gene:Pdlim7 / 67399 MGIID:1914649 Length:457 Species:Mus musculus


Alignment Length:20 Identity:6/20 - (30%)
Similarity:14/20 - (70%) Gaps:1/20 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 RRQKF-YQKFDQMLMVISIY 145
            ||::: :||..|..::.::|
Mouse   175 RREEWKFQKTRQTWLLQNMY 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717
LIM2_PINCH 82..133 CDD:188718 2/6 (33%)
LIM3_PINCH 146..206 CDD:188719 6/20 (30%)
LIM4_PINCH 212..265 CDD:188720
LIM5_PINCH 273..326 CDD:188721
Pdlim7NP_001107560.1 PDZ_PDLIM-like 5..83 CDD:467235
PHA03247 <81..247 CDD:223021 6/20 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 82..166
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..226 2/9 (22%)
LIM1_Enigma 282..333 CDD:188836
LIM2_Enigma 341..392 CDD:188840
LIM3_Enigma 400..454 CDD:188842
Blue background indicates that the domain is not in the aligned region.

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