Sequence 1: | NP_731242.1 | Gene: | stck / 40999 | FlyBaseID: | FBgn0020249 | Length: | 348 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012814522.1 | Gene: | prickle1 / 549693 | XenbaseID: | XB-GENE-486941 | Length: | 871 | Species: | Xenopus tropicalis |
Alignment Length: | 285 | Identity: | 70/285 - (24%) |
---|---|---|---|
Similarity: | 96/285 - (33%) | Gaps: | 106/285 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 MYS---KAEVVQAAN---MSLGAMH--CTRCADGFEPTEKIVNSNGEL------------WHTQC 46
Fly 47 FVCAQCFRPFQDGIFYEFEGRKYCERDFHVLFAPCCNKCGEFVIGRVIKAMSASWHPQCFRCQLC 111
Fly 112 AKELADCGFIKNQNRALCHECNAKVKAEITGRYVCQKCHGLIDEEPLRFRGEVYHGYHFSCTACG 176
Fly 177 TELDSTAREVK-SRPGLAANDMNELYCLRCHDKMGIPICGACRRPI--EERVVTALGKHWHVEH- 237
Fly 238 -FVCAKCEKPFLGHRHYEKRGLAYC 261 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
stck | NP_731242.1 | LIM1_PINCH | 21..79 | CDD:188717 | 20/69 (29%) |
LIM2_PINCH | 82..133 | CDD:188718 | 6/50 (12%) | ||
LIM3_PINCH | 146..206 | CDD:188719 | 12/60 (20%) | ||
LIM4_PINCH | 212..265 | CDD:188720 | 18/54 (33%) | ||
LIM5_PINCH | 273..326 | CDD:188721 | |||
prickle1 | XP_012814522.1 | PET_Prickle | 60..156 | CDD:193602 | 5/18 (28%) |
LIM1_Prickle | 164..222 | CDD:188799 | 19/65 (29%) | ||
LIM2_Prickle | 227..282 | CDD:188802 | 24/127 (19%) | ||
LIM3_Prickle | 287..345 | CDD:188804 | 18/54 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X39 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |