Sequence 1: | NP_731242.1 | Gene: | stck / 40999 | FlyBaseID: | FBgn0020249 | Length: | 348 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017457250.1 | Gene: | Lims1 / 499443 | RGDID: | 1560732 | Length: | 407 | Species: | Rattus norvegicus |
Alignment Length: | 337 | Identity: | 219/337 - (64%) |
---|---|---|---|
Similarity: | 262/337 - (77%) | Gaps: | 13/337 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 MYSKAEVVQAANM--SLGAMHCTRCADGFEPTEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYEF 64
Fly 65 EGRKYCERDFHVLFAPCCNKCGEFVIGRVIKAMSASWHPQCFRCQLCAKELADCGFIKNQNRALC 129
Fly 130 HECNAKVKAEITGRYVCQKCHGLIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAA 194
Fly 195 NDMNELYCLRCHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLA 259
Fly 260 YCETHYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKC 324
Fly 325 YDRFPNELRRRL 336 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
stck | NP_731242.1 | LIM1_PINCH | 21..79 | CDD:188717 | 42/57 (74%) |
LIM2_PINCH | 82..133 | CDD:188718 | 33/50 (66%) | ||
LIM3_PINCH | 146..206 | CDD:188719 | 29/59 (49%) | ||
LIM4_PINCH | 212..265 | CDD:188720 | 46/52 (88%) | ||
LIM5_PINCH | 273..326 | CDD:188721 | 35/52 (67%) | ||
Lims1 | XP_017457250.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166348848 | |
Domainoid | 1 | 1.000 | 118 | 1.000 | Domainoid score | I5711 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1704 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H68428 | |
Inparanoid | 1 | 1.050 | 499 | 1.000 | Inparanoid score | I1317 |
OMA | 1 | 1.010 | - | - | QHG51900 | |
OrthoDB | 1 | 1.010 | - | - | D1593918at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000055 | |
OrthoInspector | 1 | 1.000 | - | - | otm46094 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103991 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24210 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X39 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.810 |