DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and fhl5

DIOPT Version :9

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001004112.1 Gene:fhl5 / 445475 ZFINID:ZDB-GENE-040822-3 Length:280 Species:Danio rerio


Alignment Length:290 Identity:72/290 - (24%)
Similarity:110/290 - (37%) Gaps:25/290 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TQCFVCAQCFRPFQDGIFYEFEGRKYCERDFHVLFAPCCNKCGEFVIGRVIKAMS---ASWHPQC 105
            |:.|.|..|........:...|..:||.:.:..|||.||..| ...||...|.:|   ..||..|
Zfish     3 TERFDCHYCKDTLLGKKYILKEDTQYCTKCYENLFANCCEVC-SLPIGCNCKDLSYKDRHWHENC 66

  Fly   106 FRCQLCAKELADCGFIKNQNRALCHECNAKVKAEITGRYVCQKCHGLI--DEEPLRFRGEVYHGY 168
            |:|..|::.|.|..|.......||.||.:.   |.:.:  |..|...:  ....:.::|..:|..
Zfish    67 FKCAKCSRSLVDKPFAAKDELMLCTECYSH---EYSSK--CSTCKKTVMPGSRKMEYKGNSWHET 126

  Fly   169 HFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPICGACRRPIEERVVTALGKHW 233
            .|.|..|...:.:.:...|.         |..:|:.|.:|.....|.||::.|....||...|.|
Zfish   127 CFLCQRCQQPIGTKSFIPKD---------NNYFCVPCFEKQFAYQCCACKKAITTGGVTYHDKPW 182

  Fly   234 HVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVI----GGDVFTALNKAWCV 294
            |.|.|.|..|::...|.|...:....||...:..|:...|..|.:.|    |....:...:.|..
Zfish   183 HRECFTCIGCKRQLAGQRFTSRENYPYCLDCFSNLYAKKCVGCTKAITSLAGAKYISFEERQWHS 247

  Fly   295 HHFACSVCDTKMTQKSKFYEYDEKPVCKKC 324
            ..|.|..|...:..:....:.|: .:|..|
Zfish   248 ECFTCMQCSVSLVGRGFLTQRDD-ILCTDC 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717 8/34 (24%)
LIM2_PINCH 82..133 CDD:188718 18/53 (34%)
LIM3_PINCH 146..206 CDD:188719 10/61 (16%)
LIM4_PINCH 212..265 CDD:188720 17/52 (33%)
LIM5_PINCH 273..326 CDD:188721 11/56 (20%)
fhl5NP_001004112.1 LIM <6..34 CDD:295319 6/27 (22%)
LIM1_FHL 37..95 CDD:188729 22/58 (38%)
LIM 102..158 CDD:295319 11/64 (17%)
LIM3_FHL 163..214 CDD:188732 17/50 (34%)
LIM4_FHL 222..277 CDD:188733 11/56 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51900
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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