DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and Zasp52

DIOPT Version :10

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001027420.2 Gene:Zasp52 / 36740 FlyBaseID:FBgn0265991 Length:2194 Species:Drosophila melanogaster


Alignment Length:247 Identity:61/247 - (24%)
Similarity:85/247 - (34%) Gaps:78/247 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PCCNKCGEFVIGRVIKAMSASWHPQCFRC--QLCAKELADCGFIKNQNRALCHECNAKVKAEITG 142
            |.||.|...:.|..|.|:...|.|..|.|  ..|.:.|.|.||::                    
  Fly  2018 PLCNSCNVQIRGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVE-------------------- 2062

  Fly   143 RYVCQKCHGLIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHD 207
                                                                 :..:|||..|.:
  Fly  2063 -----------------------------------------------------EKGDLYCEYCFE 2074

  Fly   208 KMGIPICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNL 272
            |...|.|..|...|:...:.|:|||:|.|.|.|.:|.|.|.....:.:.|.||||..:::||...
  Fly  2075 KYLAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLEDGNAYCEADWNELFTTK 2139

  Fly   273 CFVCN-QVIGGDVFT-ALNKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCK 322
            ||.|. .|..||.:. |||..:....|.|:.|...:..:| ||....:|.||
  Fly  2140 CFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNLEGQS-FYNKGGRPFCK 2190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717
LIM2_PINCH 82..133 CDD:188718 15/52 (29%)
LIM3_PINCH 146..206 CDD:188719 3/59 (5%)
LIM4_PINCH 212..265 CDD:188720 20/52 (38%)
LIM5_PINCH 273..326 CDD:188721 18/52 (35%)
Zasp52NP_001027420.2 PDZ_ZASP52-like 8..88 CDD:467281
DUF4749 150..>218 CDD:464948
LIM_ALP_like 282..333 CDD:188746
PHA03247 <762..1006 CDD:223021
LIM1_Enigma_like_1 2020..2073 CDD:188839 18/125 (14%)
LIM 2081..2132 CDD:259829 19/50 (38%)
LIM3_Enigma_like_1 2140..2193 CDD:188845 18/52 (35%)
Blue background indicates that the domain is not in the aligned region.

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