| Sequence 1: | NP_731242.1 | Gene: | stck / 40999 | FlyBaseID: | FBgn0020249 | Length: | 348 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006254658.1 | Gene: | Lims2 / 361303 | RGDID: | 1305273 | Length: | 341 | Species: | Rattus norvegicus |
| Alignment Length: | 337 | Identity: | 220/337 - (65%) |
|---|---|---|---|
| Similarity: | 265/337 - (78%) | Gaps: | 12/337 - (3%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 12 ANMS--LGAMHCTRCADGFEPTEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYEFEGRKYCERDF 74
Fly 75 HVLFAPCCNKCGEFVIGRVIKAMSASWHPQCFRCQLCAKELADCGFIKNQNRALCHECNAKVKAE 139
Fly 140 ITGRYVCQKCHGLIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLR 204
Fly 205 CHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLF 269
Fly 270 GNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKCYDRFPNELRR 334
Fly 335 RLRTAHEMTMKK 346 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| stck | NP_731242.1 | LIM1_PINCH | 21..79 | CDD:188717 | 42/57 (74%) |
| LIM2_PINCH | 82..133 | CDD:188718 | 35/50 (70%) | ||
| LIM3_PINCH | 146..206 | CDD:188719 | 30/59 (51%) | ||
| LIM4_PINCH | 212..265 | CDD:188720 | 48/52 (92%) | ||
| LIM5_PINCH | 273..326 | CDD:188721 | 31/52 (60%) | ||
| Lims2 | XP_006254658.1 | LIM1_PINCH | 15..73 | CDD:188717 | 42/57 (74%) |
| LIM2_PINCH | 76..127 | CDD:188718 | 35/50 (70%) | ||
| LIM3_PINCH | 140..190 | CDD:188719 | 30/59 (51%) | ||
| LIM4_PINCH | 196..249 | CDD:188720 | 48/52 (92%) | ||
| LIM5_PINCH | 257..310 | CDD:188721 | 31/52 (60%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166348847 | |
| Domainoid | 1 | 1.000 | 118 | 1.000 | Domainoid score | I5711 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG1704 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 499 | 1.000 | Inparanoid score | I1317 |
| OMA | 1 | 1.010 | - | - | QHG51900 | |
| OrthoDB | 1 | 1.010 | - | - | D1593918at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0000055 | |
| OrthoInspector | 1 | 1.000 | - | - | otm46094 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103991 | |
| Panther | 1 | 1.100 | - | - | O | PTHR24210 |
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 1 | 1.000 | - | - | X39 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 14 | 13.810 | |||||