Protein Alignment stck and Limch1

DIOPT Version :9

• Sequence 1: NP_731242.1
• Gene: stck / 40999
• FlyBaseID: FBgn0020249
• Length: 348
• Species: Drosophila melanogaster
• Sequence 2: XP_038947830.1
• Gene: Limch1 / 305332
• RGDID: 1305269
• Length: 1561
• Species: Rattus norvegicus
• Alignment Length: 59
• Identity: 18/59 - (30%)
• Similarity: 32/59 - (54%)
• Gaps: 9/59 - (15%)

  Fly    82 CNKCGEFVIGR----VIKAMSASWHPQCFRCQLCAKELADC---GFIKNQNRAL-CHEC 132
            |:.|| ..:|:    :|:.::..:|.|||||.:|..:|.|.   ..::.:|..| |.:|
  Rat  1491 CSSCG-LALGKGAAMIIETLNLYFHIQCFRCGICKGQLGDAVSGTDVRIRNGLLNCTDC 1548

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
stck	NP_731242.1	LIM1_PINCH	21..79	CDD:188717
		LIM2_PINCH	82..133	CDD:188718	18/59 (31%)
		LIM3_PINCH	146..206	CDD:188719
		LIM4_PINCH	212..265	CDD:188720
		LIM5_PINCH	273..326	CDD:188721
Limch1	XP_038947830.1	CH_LIMCH1	23..140	CDD:409127
		DUF4757	250..>311	CDD:406382
		PRK07764	<276..>412	CDD:236090
		DUF4757	<737..868	CDD:406382
		GBP_C	<1245..1282	CDD:419202
		LIM	1491..1548	CDD:214528	17/57 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1704
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900