DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stck and FHL1

DIOPT Version :10

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001427698.1 Gene:FHL1 / 2273 HGNCID:3702 Length:339 Species:Homo sapiens


Alignment Length:255 Identity:67/255 - (26%)
Similarity:97/255 - (38%) Gaps:48/255 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FVCAQCFRPFQDGIFYEFEGRKYCERDFHVLFAPCCNKC-GEFVIGRVI---KAMSAS------- 100
            |.|..|..|.|        |:||.::|.|    .||.|| .:|.....:   |.:.|.       
Human    21 FDCHYCRDPLQ--------GKKYVQKDGH----HCCLKCFDKFCANTCVECRKPIGADSKEVHYK 73

  Fly   101 ---WHPQCFRCQLCAKELADCGFIKNQNRALCHECNAKVKAEITGRYVCQKCHG-----LIDEEP 157
               ||..||||..|...||:..|:...|:.||::|        |.|....||.|     :..::.
Human    74 NRFWHDTCFRCAKCLHPLANETFVAKDNKILCNKC--------TTREDSPKCKGCFKAIVAGDQN 130

  Fly   158 LRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPICGACRRPIE 222
            :.::|.|:|...|:|:.|...:.:.:...|.         .:.||:.||:......|..|.:.|.
Human   131 VEYKGTVWHKDCFTCSNCKQVIGTGSFFPKG---------EDFYCVTCHETKFAKHCVKCNKAIT 186

  Fly   223 ERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVIGG 282
            ...:|...:.||.:.|||..|.|...|.|........||...|.......|..|...|.|
Human   187 SGGITYQDQPWHADCFVCVTCSKKLAGQRFTAVEDQYYCVDCYKNFVAKKCAGCKNPITG 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717 10/31 (32%)
LIM2_PINCH 82..133 CDD:188718 19/64 (30%)
LIM3_PINCH 146..206 CDD:188719 12/64 (19%)
LIM4_PINCH 212..265 CDD:188720 15/52 (29%)
LIM5_PINCH 273..326 CDD:188721 4/10 (40%)
FHL1NP_001427698.1 None

Return to query results.
Submit another query.