DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and Pxn

DIOPT Version :10

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001389995.1 Gene:Pxn / 19303 MGIID:108295 Length:1088 Species:Mus musculus


Alignment Length:322 Identity:95/322 - (29%)
Similarity:133/322 - (41%) Gaps:81/322 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SKAEVVQAANMSLGAMHCTRCADGFEPTEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYEFEGRK 68
            :|..|...|....||  |.:...|     ::|.:.|:.||.:.|||..|........|:|.:|:.
Mouse   843 NKLGVATVAKGVCGA--CKKPIAG-----QVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQP 900

  Fly    69 YCERDFHVLFAPCCNKCGEFVIGRVIKAMSASWHPQCFRCQLCAKELADCGFIKNQNRALCHECN 133
            |||:|:|.||:|.|..|...::.:|:.|:..:|||:.|.|       |.||              
Mouse   901 YCEKDYHSLFSPRCYYCNGPILDKVVTALDRTWHPEHFFC-------AQCG-------------- 944

  Fly   134 AKVKAEITGRYVCQKCHGLIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMN 198
                                     .|.|.  .|:|        |.|..|               
Mouse   945 -------------------------AFFGP--EGFH--------EKDGKA--------------- 959

  Fly   199 ELYCLRCHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCET 263
              ||.:.:..|..|.||.|.|.|.|..::||...||.|.|||.:|..||:....:|..|..|||.
Mouse   960 --YCRKDYFDMFAPKCGGCARAILENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEV 1022

  Fly   264 HYHQLFGNLCFVCNQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKCY 325
            |||:..|:||..|.:.|.|...||:.|.:...||.|:.| .|...|..|.|.::||.|:.|:
Mouse  1023 HYHERRGSLCSGCQKPITGRCITAMAKKFHPEHFVCAFC-LKQLNKGTFKEQNDKPYCQSCF 1083

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717 19/57 (33%)
LIM2_PINCH 82..133 CDD:188718 12/50 (24%)
LIM3_PINCH 146..206 CDD:188719 9/59 (15%)
LIM4_PINCH 212..265 CDD:188720 23/52 (44%)
LIM5_PINCH 273..326 CDD:188721 19/53 (36%)
PxnNP_001389995.1 LD motif 1 3..15
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..139
Paxillin 54..253 CDD:460962
LD motif 2 144..156
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..261
LD motif 3 216..228
LD motif 4 265..276
LIM1_Paxillin_like 855..907 CDD:259830 19/58 (33%)
LIM2_Paxillin 914..965 CDD:188791 21/123 (17%)
LIM3_Paxillin_like 973..1025 CDD:188724 23/51 (45%)
LIM4_Paxillin 1032..1083 CDD:188795 18/51 (35%)
Blue background indicates that the domain is not in the aligned region.

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