DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and Y65B4A.7

DIOPT Version :10

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_490764.1 Gene:Y65B4A.7 / 190486 WormBaseID:WBGene00022030 Length:156 Species:Caenorhabditis elegans


Alignment Length:128 Identity:39/128 - (30%)
Similarity:53/128 - (41%) Gaps:13/128 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 CQKCHGLIDEEP------LRFRGEVYHGYHFSCTACGTELDSTAREVKSRP-GLAANDMNELYCL 203
            |:.|...:..:.      ::.:.|:||.....|:.|.|.:..|.......| |      |.|.|.
 Worm    21 CKGCTTTLTRQEAQTGKVIKIQDEMYHISCLKCSVCQTVIGMTPCYPMPAPYG------NALRCA 79

  Fly   204 RCHDKMGIPICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYH 266
            .||.....|.|.||:.|..||.|:|...|||:..|.|..|..|..|..:...:|.||.|..||
 Worm    80 DCHRAAKSPKCHACKLPTFERCVSAFNVHWHMACFKCKACRHPIKGQEYVVHQGCAYDEDCYH 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717
LIM2_PINCH 82..133 CDD:188718
LIM3_PINCH 146..206 CDD:188719 14/66 (21%)
LIM4_PINCH 212..265 CDD:188720 21/52 (40%)
LIM5_PINCH 273..326 CDD:188721
Y65B4A.7NP_490764.1 LIM_DA1 90..141 CDD:188782 20/50 (40%)
Blue background indicates that the domain is not in the aligned region.

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