DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and Ajuba

DIOPT Version :9

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_034720.2 Gene:Ajuba / 16475 MGIID:1341886 Length:547 Species:Mus musculus


Alignment Length:275 Identity:66/275 - (24%)
Similarity:94/275 - (34%) Gaps:105/275 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 CTRCADGFEPTEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYEFEGRKYCERDFHVLFA------ 79
            |.:|..|.........:...|:|||||||..|.|..:...||...|..|||.|:  ||:      
Mouse   347 CIKCNKGIYGQSNACQALDSLYHTQCFVCCSCGRTLRCKAFYSVNGSVYCEEDY--LFSGFQEAA 409

  Fly    80 -PCCNKCGEFVIGRVIKAMSASWHPQCFRCQLCAKELADCGFIKNQNRALCHECNAKVKAEITGR 143
             .|| .||..::.::::||..|:||.||||                                   
Mouse   410 EKCC-VCGHLILEKILQAMGKSYHPGCFRC----------------------------------- 438

  Fly   144 YVCQKCHGLIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDK 208
            .||.||   :|..|..        ..||                          |::||:..:.|
Mouse   439 IVCNKC---LDGVPFT--------VDFS--------------------------NQVYCVTDYHK 466

  Fly   209 MGIPICGACRRPI------EERV-VTALGKHWHVEHFVCAKCEK-----------PFLGHR---- 251
            ...|.|.||.:||      |:.| |.::.:.:|.|.:.|..|..           |..||.    
Mouse   467 NYAPKCAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCCFPLDGHLLCHG 531

  Fly   252 -HYEKRGLAYCETHY 265
             |.::.......|:|
Mouse   532 CHMQRLSARQPSTNY 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717 21/57 (37%)
LIM2_PINCH 82..133 CDD:188718 12/50 (24%)
LIM3_PINCH 146..206 CDD:188719 10/59 (17%)
LIM4_PINCH 212..265 CDD:188720 18/75 (24%)
LIM5_PINCH 273..326 CDD:188721
AjubaNP_034720.2 PreLIM 1..344
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..182
Nuclear localization signal. /evidence=ECO:0000255 289..297
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 302..332
LIM1_Ajuba_like 347..400 CDD:188738 19/52 (37%)
LIM2_Ajuba_like 412..464 CDD:188741 24/124 (19%)
LIM3_Ajuba_like 472..533 CDD:188822 15/60 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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