DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and Fhl4

DIOPT Version :10

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_034344.2 Gene:Fhl4 / 14202 MGIID:1338765 Length:279 Species:Mus musculus


Alignment Length:291 Identity:73/291 - (25%)
Similarity:110/291 - (37%) Gaps:32/291 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FVCAQCFRPFQDGIFYEFEGRKYCERDFHVLFAPCCNKCGEFVIGRVIKAM---SASWHPQCFRC 108
            |.|..|....|...:.:.:|..||...|....|..|.:|.: .||...|.:   ...||..||:|
Mouse     4 FKCHHCEESLQGKKYVQKDGANYCVTCFDSHCANICQECHK-PIGADSKEVCYKEQFWHNTCFKC 67

  Fly   109 QLCAKELADCGFIKNQNRALCHECNAKVKAEITGRYVCQKCHGLI-----DEEPLRFRGEVYHGY 168
            ..|::.||...|:......||::|..:|        ...||.|.:     .:..:.::|.::|..
Mouse    68 SKCSQLLATETFVAWDKNILCNKCATRV--------TFPKCKGCLKDIEEGDHNVEYKGSIWHKN 124

  Fly   169 HFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPICGACRRPIEERVVTALGKHW 233
            .|.||.|        :::.........| ...||:.|:|.:....|..|::||....|:...:.|
Mouse   125 CFVCTNC--------KDIIGTKNFFPKD-EGFYCVTCYDALFTKHCMKCKKPITSGGVSYQDQPW 180

  Fly   234 HVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVI-----GGDVFTALNKAWC 293
            |.|.|||..|.|...|.|........:|...|.......|..|...|     |.:|......:|.
Mouse   181 HSECFVCVSCSKELSGQRFTAMDDQYFCVDCYKNYIAKKCAGCKNPITGFGKGANVVAHEQNSWH 245

  Fly   294 VHHFACSVCDTKMTQKSKFYEYDEKPVCKKC 324
            .:.|.|..|...:..| .|..:||:..|..|
Mouse   246 DYCFNCKTCSVNLANK-HFVFHDEQVYCPDC 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717 8/31 (26%)
LIM2_PINCH 82..133 CDD:188718 16/53 (30%)
LIM3_PINCH 146..206 CDD:188719 12/64 (19%)
LIM4_PINCH 212..265 CDD:188720 16/52 (31%)
LIM5_PINCH 273..326 CDD:188721 15/57 (26%)
Fhl4NP_034344.2 LIM <4..32 CDD:413332 7/27 (26%)
LIM 39..92 CDD:413332 16/53 (30%)
LIM2_FHL1 100..157 CDD:188808 13/65 (20%)
LIM3_FHL1 161..213 CDD:188813 16/51 (31%)
LIM4_FHL1 216..279 CDD:188734 15/61 (25%)

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