DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and Fhl2

DIOPT Version :9

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001276462.1 Gene:Fhl2 / 14200 MGIID:1338762 Length:279 Species:Mus musculus


Alignment Length:298 Identity:78/298 - (26%)
Similarity:120/298 - (40%) Gaps:41/298 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TQCFVCAQCFRPFQDGIFYEFEGRKY--------CERDFHVLFAPCCNKCGEFVIGRVIKAMS-- 98
            |:.|.|..|    .:.::    |:||        |...|..|:|..|.:||. .||...|.:|  
Mouse     2 TERFDCHHC----NESLY----GKKYILKEENPHCVACFEELYANTCEECGT-PIGCDCKDLSYK 57

  Fly    99 -ASWHPQCFRCQLCAKELADCGFIKNQNRALCHECNAKVKAEITGRYVCQKCHGLI--DEEPLRF 160
             ..||..||.|..|...|.|..|...:.:.||.:|.:.   |.:.:  ||:|...|  ....:.:
Mouse    58 DRHWHEGCFHCSRCGSSLVDKPFAAKEEQLLCTDCYSN---EYSSK--CQECKKTIMPGTRKMEY 117

  Fly   161 RGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPICGACRRPIEERV 225
            :|..:|...|:|..|...:.:.:...|.         |:.:|:.|::|.....|..|::||....
Mouse   118 KGSSWHETCFTCQRCQQPIGTKSFIPKE---------NQNFCVPCYEKQYALQCVQCKKPITTGG 173

  Fly   226 VTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVI---GGDVFTA 287
            ||...:.||.|.|||..|:|...|.|...:....||.|.:..|:...|..|...|   ||..:.:
Mouse   174 VTYREQPWHKECFVCTACKKQLSGQRFTARDEFPYCLTCFCDLYAKKCAGCTNPISGLGGTKYIS 238

  Fly   288 L-NKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKC 324
            . .:.|....|.|..|...:..:....|.|: .:|..|
Mouse   239 FEERQWHNDCFNCKKCSLSLVGRGFLTERDD-ILCPDC 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717 10/42 (24%)
LIM2_PINCH 82..133 CDD:188718 18/53 (34%)
LIM3_PINCH 146..206 CDD:188719 12/61 (20%)
LIM4_PINCH 212..265 CDD:188720 19/52 (37%)
LIM5_PINCH 273..326 CDD:188721 13/56 (23%)
Fhl2NP_001276462.1 LIM <5..33 CDD:413332 7/35 (20%)
LIM 36..97 CDD:413332 20/64 (31%)
LIM 101..157 CDD:413332 13/64 (20%)
LIM 162..218 CDD:413332 20/55 (36%)
LIM4_FHL2 221..278 CDD:188817 13/56 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51900
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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