Sequence 1: | NP_731242.1 | Gene: | stck / 40999 | FlyBaseID: | FBgn0020249 | Length: | 348 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012812021.1 | Gene: | lims1 / 100216119 | XenbaseID: | XB-GENE-967923 | Length: | 397 | Species: | Xenopus tropicalis |
Alignment Length: | 339 | Identity: | 217/339 - (64%) |
---|---|---|---|
Similarity: | 261/339 - (76%) | Gaps: | 15/339 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 ANMSLGAMHCTRCADGFEPTEKIVNSNGELWHTQCFVCAQCFRPFQDGIFYEFEGRKYCERDFHV 76
Fly 77 LFAPCCNKCGEFVIGRVIKAMSASWHPQCFRCQLCAKELADCGFIKNQNRALCHECNAKVKAEIT 141
Fly 142 GRYVCQKCHGLIDEEPLRFRGEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCH 206
Fly 207 DKMGIPICGACRRPIEERVVTALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGN 271
Fly 272 LCFVCNQVIGGDVFTALNKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKCYDRFPNELRRRL 336
Fly 337 ----RTAHEMTMKK 346 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
stck | NP_731242.1 | LIM1_PINCH | 21..79 | CDD:188717 | 42/57 (74%) |
LIM2_PINCH | 82..133 | CDD:188718 | 32/50 (64%) | ||
LIM3_PINCH | 146..206 | CDD:188719 | 29/59 (49%) | ||
LIM4_PINCH | 212..265 | CDD:188720 | 46/52 (88%) | ||
LIM5_PINCH | 273..326 | CDD:188721 | 35/52 (67%) | ||
lims1 | XP_012812021.1 | LIM1_PINCH | 73..131 | CDD:188717 | 42/57 (74%) |
LIM2_PINCH | 134..185 | CDD:188718 | 32/50 (64%) | ||
LIM3_PINCH | 198..248 | CDD:188719 | 29/59 (49%) | ||
LIM4_PINCH | 254..307 | CDD:188720 | 46/52 (88%) | ||
LIM5_PINCH | 315..368 | CDD:188721 | 35/52 (67%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 116 | 1.000 | Domainoid score | I5925 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H68428 | |
Inparanoid | 1 | 1.050 | 498 | 1.000 | Inparanoid score | I1344 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1593918at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000055 | |
OrthoInspector | 1 | 1.000 | - | - | oto104909 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24210 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R5868 |
SonicParanoid | 1 | 1.000 | - | - | X39 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 10.190 |