DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and fhl2

DIOPT Version :10

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001120233.1 Gene:fhl2 / 100145283 XenbaseID:XB-GENE-969632 Length:279 Species:Xenopus tropicalis


Alignment Length:297 Identity:72/297 - (24%)
Similarity:120/297 - (40%) Gaps:39/297 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TQCFVCAQCFRPFQDGIFYEFEGRK--------YCERDFHVLFAPCCNKCGEFV--IGRVIKAMS 98
            |:.|.|..|    ::.:|    |:|        ||.:.:..|::..|.:|.:.:  .|:.:....
 Frog     2 TERFDCHYC----KESLF----GKKYLLREENPYCVKCYESLYSNSCEECKKPIGCDGKDLSYKD 58

  Fly    99 ASWHPQCFRCQLCAKELADCGFIKNQNRALCHECNAKVKAEITGRYVCQKCHGLI--DEEPLRFR 161
            ..||..||.|..|.|.|.|..|.......:|.||.:.   |.:.:  |.:|...|  ....:.::
 Frog    59 RHWHESCFHCFQCKKSLVDKPFAAKDEHLICTECYSN---EYSSK--CSECKKTIMPGTRKMEYK 118

  Fly   162 GEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPICGACRRPIEERVV 226
            |..:|...|.|:.|...:.:.:...|.         |:.:|:.|::|.....|..|::.|....|
 Frog   119 GNSWHETCFICSRCQQPIGTKSFIPKD---------NQNFCVACYEKQFAMHCVQCKKAITTGGV 174

  Fly   227 TALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVI---GGDVFTAL 288
            |...:.||.|.|:|..|:||..|.|...:...|||...:..|:...|..|...|   ||..:.:.
 Frog   175 TYRDQPWHKECFICTGCKKPLSGQRFTSRDEFAYCLNCFCNLYAKKCAGCTNPISGLGGAKYISF 239

  Fly   289 -NKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKC 324
             .:.|....|.|..|...:..:....|.|: .:|.:|
 Frog   240 EERQWHSDCFNCKKCAISLVGRGFLTERDD-ILCPEC 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717 10/42 (24%)
LIM2_PINCH 82..133 CDD:188718 15/52 (29%)
LIM3_PINCH 146..206 CDD:188719 11/61 (18%)
LIM4_PINCH 212..265 CDD:188720 18/52 (35%)
LIM5_PINCH 273..326 CDD:188721 13/56 (23%)
fhl2NP_001120233.1 LIM <5..33 CDD:413332 8/35 (23%)
LIM1_FHL2 36..97 CDD:188806 16/63 (25%)
LIM2_FHL2 101..157 CDD:188810 12/64 (19%)
LIM3_Fhl2 162..218 CDD:188815 19/55 (35%)
LIM4_FHL2 221..278 CDD:188817 13/56 (23%)

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