DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and fhl2

DIOPT Version :9

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001120233.1 Gene:fhl2 / 100145283 XenbaseID:XB-GENE-969632 Length:279 Species:Xenopus tropicalis


Alignment Length:297 Identity:72/297 - (24%)
Similarity:120/297 - (40%) Gaps:39/297 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 TQCFVCAQCFRPFQDGIFYEFEGRK--------YCERDFHVLFAPCCNKCGEFV--IGRVIKAMS 98
            |:.|.|..|    ::.:|    |:|        ||.:.:..|::..|.:|.:.:  .|:.:....
 Frog     2 TERFDCHYC----KESLF----GKKYLLREENPYCVKCYESLYSNSCEECKKPIGCDGKDLSYKD 58

  Fly    99 ASWHPQCFRCQLCAKELADCGFIKNQNRALCHECNAKVKAEITGRYVCQKCHGLI--DEEPLRFR 161
            ..||..||.|..|.|.|.|..|.......:|.||.:.   |.:.:  |.:|...|  ....:.::
 Frog    59 RHWHESCFHCFQCKKSLVDKPFAAKDEHLICTECYSN---EYSSK--CSECKKTIMPGTRKMEYK 118

  Fly   162 GEVYHGYHFSCTACGTELDSTAREVKSRPGLAANDMNELYCLRCHDKMGIPICGACRRPIEERVV 226
            |..:|...|.|:.|...:.:.:...|.         |:.:|:.|::|.....|..|::.|....|
 Frog   119 GNSWHETCFICSRCQQPIGTKSFIPKD---------NQNFCVACYEKQFAMHCVQCKKAITTGGV 174

  Fly   227 TALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVI---GGDVFTAL 288
            |...:.||.|.|:|..|:||..|.|...:...|||...:..|:...|..|...|   ||..:.:.
 Frog   175 TYRDQPWHKECFICTGCKKPLSGQRFTSRDEFAYCLNCFCNLYAKKCAGCTNPISGLGGAKYISF 239

  Fly   289 -NKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKC 324
             .:.|....|.|..|...:..:....|.|: .:|.:|
 Frog   240 EERQWHSDCFNCKKCAISLVGRGFLTERDD-ILCPEC 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717 10/42 (24%)
LIM2_PINCH 82..133 CDD:188718 15/52 (29%)
LIM3_PINCH 146..206 CDD:188719 11/61 (18%)
LIM4_PINCH 212..265 CDD:188720 18/52 (35%)
LIM5_PINCH 273..326 CDD:188721 13/56 (23%)
fhl2NP_001120233.1 LIM <5..33 CDD:413332 8/35 (23%)
LIM1_FHL2 36..97 CDD:188806 16/63 (25%)
LIM2_FHL2 101..157 CDD:188810 12/64 (19%)
LIM3_Fhl2 162..218 CDD:188815 19/55 (35%)
LIM4_FHL2 221..278 CDD:188817 13/56 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51900
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000055
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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