DRSC/TRiP Functional Genomics Resources

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Protein Alignment stck and fhl5

DIOPT Version :10

Sequence 1:NP_731242.1 Gene:stck / 40999 FlyBaseID:FBgn0020249 Length:348 Species:Drosophila melanogaster
Sequence 2:NP_001116957.1 Gene:fhl5 / 100144736 XenbaseID:XB-GENE-1002465 Length:282 Species:Xenopus tropicalis


Alignment Length:296 Identity:72/296 - (24%)
Similarity:122/296 - (41%) Gaps:44/296 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 CFVCAQCFRPFQDGIFYEFEGRK--------YCERDFHVLFAPCCNKCGEFV--IGRVIKAMSAS 100
            ||.|.:           ...|:|        ||.:.|:.|||..|.:|.:.:  ..:.:....:.
 Frog     8 CFHCKE-----------SLYGKKYTLKDDIPYCIKCFNSLFANLCERCKKPIECNSKDLAYKDSH 61

  Fly   101 WHPQCFRCQLCAKELADCGFIKNQNRALCHECNAKVKAEITGRYVCQKCHGLI--DEEPLRFRGE 163
            ||..||:|..|...|.:..|.......||.||   ...|.:.:  |..|...|  ....:.:.|.
 Frog    62 WHETCFKCDKCDHSLVEKPFAAKDELLLCIEC---YSTEYSSK--CFGCRATIMPGSRKMEYNGS 121

  Fly   164 VYHGYHFSCTACGTELDSTARE-VKSRPGLAANDMNELYCLRCHDKMGIPICGACRRPIEERVVT 227
            .:|...|.|.:|        || |.::|.:...  :::||:.|::|.....|.:||:.|.:..::
 Frog   122 NWHETCFVCQSC--------REPVGNKPFIPKE--SKIYCMPCYEKQFANQCKSCRKAITKGGLS 176

  Fly   228 ALGKHWHVEHFVCAKCEKPFLGHRHYEKRGLAYCETHYHQLFGNLCFVCNQVI---GGDVFTAL- 288
            ...:.||.|.|||..|:|..:|.:...:....||...:..|:...|..|.:.|   ||..:.:. 
 Frog   177 FQEQQWHRECFVCTSCKKNLVGEKSTSRDESPYCVDCFDNLYAKKCAACAKPITGQGGAKYISFE 241

  Fly   289 NKAWCVHHFACSVCDTKMTQKSKFYEYDEKPVCKKC 324
            ::.|....|.|:.| :|.....||:..::..:|..|
 Frog   242 DRQWHSDCFTCAKC-SKSLVGEKFHTNEDDVLCPSC 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stckNP_731242.1 LIM1_PINCH 21..79 CDD:188717 9/40 (23%)
LIM2_PINCH 82..133 CDD:188718 13/52 (25%)
LIM3_PINCH 146..206 CDD:188719 14/62 (23%)
LIM4_PINCH 212..265 CDD:188720 15/52 (29%)
LIM5_PINCH 273..326 CDD:188721 14/56 (25%)
fhl5NP_001116957.1 LIM <6..33 CDD:413332 7/35 (20%)
LIM1_FHL 37..95 CDD:188729 16/60 (27%)
LIM2_FHL 102..155 CDD:188731 14/62 (23%)
LIM3_FHL 163..214 CDD:188732 15/50 (30%)
LIM4_FHL 222..277 CDD:188733 14/56 (25%)

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