DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg13 and ATG13

DIOPT Version :10

Sequence 1:NP_649796.1 Gene:Atg13 / 40998 FlyBaseID:FBgn0261108 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_015511.1 Gene:ATG13 / 856315 SGDID:S000006389 Length:738 Species:Saccharomyces cerevisiae


Alignment Length:689 Identity:133/689 - (19%)
Similarity:235/689 - (34%) Gaps:228/689 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AERDLEKFIKFLV----LKSTQVVVQSRLGEKMQTQCNPLAGSD-WFNIAVQDHPEVLDETKRAL 68
            ||.|:||.:..|:    ||:|.::..:.......:..|.....| ||    :||.|::.|....:
Yeast     3 AEEDIEKQVLQLIDSFFLKTTLLICSTESSRYQSSTENIFLFDDTWF----EDHSELVSELPEII 63

  Fly    69 NLKTGESILQRL-PLCVE-------------ISLKTTEG-----------DQMVLEVWSLDLLQP 108
            :..:.....:.| ||.||             :.||..||           .::|:|.|.::|   
Yeast    64 SKWSHYDGRKELPPLVVETYLDLRQLNSSHLVRLKDHEGHLWNVCKGTKKQEIVMERWLIEL--- 125

  Fly   109 QNGASPA----TNDLNPEGQTLKAAHAIYNRMGIMLKSLISLTRTTPAYKL-------------- 155
             :.:||.    :.|.....:..|....::.    .|.:||.|..||..|:|              
Yeast   126 -DNSSPTFKSYSEDETDVNELSKQLVLLFR----YLLTLIQLLPTTELYQLLIKSYNGPQNEGSS 185

  Fly   156 ----------SRRQC--PDSYGIFY--RIYVDRPQVHT----LGEGH--KHV---KIGQLSTIVG 197
                      |.|.|  ..|..|..  ||.:.:|.::|    |.|.:  .|:   ||..:.|..|
Yeast   186 NPITSTGPLVSIRTCVLDGSKPILSKGRIGLSKPIINTYSNALNESNLPAHLDQKKITPVWTKFG 250

  Fly   198 SLVMSVAYRT--KLTISPTAAQSESNTIMLKSDHFRPATDANTPGNQ--QQTQNGTVVAKKLGLG 258
            .|.:||:||.  |..|:.|      |..:..:.|...:.::..|.||  |:.|:...:.|:    
Yeast   251 LLRVSVSYRRDWKFEINNT------NDELFSARHASVSHNSQGPQNQPEQEGQSDQDIGKR---- 305

  Fly   259 ALNP----------------------------AQGTADRRFIDIEKPLRPGAFTDMGKLKQYTED 295
              .|                            .:...|||.:.:....|..:|......|:    
Yeast   306 --QPQFQQQQQPQQQQQQQQQQQRQHQVQTQQQRQIPDRRSLSLSPCTRANSFEPQSWQKK---- 364

  Fly   296 DFVLPETPPFEWLLRGRGSVESLNRLDNNS-------VASVNISNNNNSTQDSKFNQISNLNNNS 353
              |.|.:.|.:....|....:|.:|..:||       |...::|:|.....:.:...:.:.:..|
Yeast   365 --VYPISRPVQPFKVGSIGSQSASRNPSNSSFFNQPPVHRPSMSSNYGPQMNIEGTSVGSTSKYS 427

  Fly   354 AGFKSFEK--------NSENSVSPIKSLLIPASATATYRH-----HSEPSL--------QPP--- 394
            :.|.:..:        |:|.....:||.|.|..:......     ..:|.|        .||   
Yeast   428 SSFGNIRRHSSVKTTENAEKVSKAVKSPLQPQESQEDLMDFVKLLEEKPDLTIKKTSGNNPPNIN 492

  Fly   395 ------------PDDDNLLKELHFPFASPTSHVNDLAKFYRECYHAPPLKGLNELQAEISSISST 447
                        |.:|.|.::|....:...:|.          ||    :|.::..:.:.|||.:
Yeast   493 ISDSLIRYQNLKPSNDLLSEDLSVSLSMDPNHT----------YH----RGRSDSHSPLPSISPS 543

  Fly   448 ----------PPASSGSGGVAACGPTAAATAIAT------SSADASAMDDLS------------- 483
                      ...::.|..:|..|..::.:|:.:      .|::...|..|.             
Yeast   544 MHYGSLNSRMSQGANASHLIARGGGNSSTSALNSRRNSLDKSSNKQGMSGLPPIFGGESTSYHHD 608

  Fly   484 ------RQLEQFETSLEDYDKLVSQFGLTGSSSTGSRSS 516
                  .||...|...::.|:|::|.   |:|:|..:||
Yeast   609 NKIQKYNQLGVEEDDDDENDRLLNQM---GNSATKFKSS 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg13NP_649796.1 ATG13 22..207 CDD:431003 56/251 (22%)
ATG13NP_015511.1 ATG13 15..261 CDD:431003 57/257 (22%)

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