DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atg13 and AT3G18770

DIOPT Version :9

Sequence 1:NP_649796.1 Gene:Atg13 / 40998 FlyBaseID:FBgn0261108 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_188507.1 Gene:AT3G18770 / 821408 AraportID:AT3G18770 Length:625 Species:Arabidopsis thaliana


Alignment Length:654 Identity:130/654 - (19%)
Similarity:237/654 - (36%) Gaps:194/654 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NAAERDLEKFIKFLVLKSTQVVVQSRL---------GEKMQTQCNPLAGSD----------WFNI 52
            |:.....|:.|.....||..::::||.         ||:|  .|:|.:.|.          |||:
plant    12 NSEGAKAEQIIFEFFAKSLHIILESRTPFMSSRNFSGEQM--ICSPSSSSSSSSSVRPRDKWFNL 74

  Fly    53 AVQDHPEVLD--ETKRALNLKTGESILQRLPLCVEISL--KTTEGDQ------------------ 95
            |:::.|..|:  :..|..:|:         ||.|::.|  :...|||                  
plant    75 ALRECPAALESFDIGRRSSLE---------PLVVDVVLVVRPLVGDQSGKRELIRNFSGKDYQSG 130

  Fly    96 ---------------MVLEVWSLDLLQPQNGASPATNDLNPEGQTLKAAHAIYNRMGIMLKSLIS 145
                           .::|.|.:.....:...|..|:........|:   .:|.:..::|:||..
plant   131 WNSDQDELGCETKNEQIIERWVVQYDNRKIRESVTTSSRRSSSNKLQ---VMYKKATLLLRSLFV 192

  Fly   146 LTRTTPAYKLSRRQCPDSYGIFYRIYVDRPQVHTLGEGHKHVKIGQL--------STIVGSLVMS 202
            :.|..||||:.|..  :|.|..::..: .|:|.::.|.....:..::        .||.|.|.:|
plant   193 MVRLLPAYKIFREL--NSSGQIFKFKL-VPRVPSIVEPFTRKEEAEMQKFSFTPVETICGRLCLS 254

  Fly   203 VAYRTKLTISPTAAQSESNTIM-----------LKSDHFRPATDANTP-----------GNQQQT 245
            |.||:...:|...:...|.|.:           ||.....|.:..:.|           .::.:.
plant   255 VLYRSLSDVSCEHSTPMSPTFITDYVGSPLADPLKRFPSLPLSYGSPPLLPFQRRHSWSFDRYKA 319

  Fly   246 QNGTVVAKKLGLGALNPAQGTADRRFI-----DIEKPLRPGAFTDMGKLKQYTED-----DFVLP 300
            ...:|        :.:|:...:|...:     ....|..|.......:.:.|.|:     ||..|
plant   320 SPPSV--------SCSPSPTRSDSHALVSHPCSRHLPPHPSDIPTGRRKESYPEEYSPCQDFSPP 376

  Fly   301 ETP--PFEWLLRGRGSVESLN--------RLDNNSVASVNISNNNNSTQDSKFNQISNLNNNSAG 355
            .:|  |...:.||....||..        :...|.||.   |.:...::.:....:.||....:|
plant   377 PSPSAPKHAVPRGITRTESAPVRIPAPTFQSKENVVAP---SAHLKLSRHASLKPVRNLGPGESG 438

  Fly   356 F---KSFEKNSENSVSPIKSLLIPASATA---TYRHHSEPSLQPPPDD-----------DNLLK- 402
            .   |.|....::...|  |.:.|:|:::   ::...|..|.|...||           |::.. 
plant   439 AAIDKLFLYGRDDFRRP--SGVRPSSSSSPRISFSRSSSRSFQDDFDDPDFPCPFDVEYDDITDR 501

  Fly   403 -----------ELHFPFASPTSH--------VNDLAKFYRECYHAPPLK-GLNE-LQAEISSISS 446
                       ::|.||.|..|:        |..|.:..::   ||||: .::| .:.||.|.::
plant   502 NSRPGSFDHRGDIHEPFDSSGSYPKKSQDAAVGALVRMLKK---APPLRQDVSESSRPEICSNNN 563

  Fly   447 TPPASSGSGGVAACGPTAAATAIATSSADASAMDDLSRQLEQFETSLEDYDKLVSQFGLTGSSST 511
            .|   :|:..:|....||:..|:| |...|.|:::| |..::.:..|           |.|.|::
plant   564 KP---AGAHEIAVASITASGIALA-SKTTADALEEL-RSYKEMKNHL-----------LLGQSTS 612

  Fly   512 GSRS 515
            ...|
plant   613 NPSS 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg13NP_649796.1 ATG13 22..207 CDD:287051 52/248 (21%)
AT3G18770NP_188507.1 ATG13 22..262 CDD:370787 54/256 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004173
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13430
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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