DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9601 and Pnkp

DIOPT Version :9

Sequence 1:NP_649792.3 Gene:CG9601 / 40994 FlyBaseID:FBgn0037578 Length:523 Species:Drosophila melanogaster
Sequence 2:NP_001004259.1 Gene:Pnkp / 308576 RGDID:1303331 Length:522 Species:Rattus norvegicus


Alignment Length:490 Identity:191/490 - (38%)
Similarity:281/490 - (57%) Gaps:23/490 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 VGRSRETGIRDSKCSKRQIQLQVDLKKAVVSLKVLGVNPCGVNGLMLMQNGERELKHGDLVEIVY 108
            :||...|.:.|.|||:.|::|..|.:...|::|.|||||..|....|.......|..||::.:|.
  Rat    33 LGRGPLTQVMDRKCSRNQVELIADPETRTVAVKQLGVNPSTVGVQELKPGVSGSLSVGDVLYLVN 97

  Fly   109 GRH----QFEVVFNP--PPE------YDKEK---AEPLSTTLSPSEKSERWDSSGNGKLVIFTSV 158
            |.:    ::|.:..|  ||:      .|.|:   .||....:..|  |..|:|.  .:|::||:.
  Rat    98 GLYPLTLRWEEISTPGSPPDTPPGNPVDPEEGKDTEPQKKRMRKS--SPGWESF--KQLLVFTAS 158

  Fly   159 GVKGSEKIAGYDMDGTIIKTKSGLVFPKNTDDWQIIFPEVPEKLKNLHKDGFKICLFTNQGGIAR 223
            |||...|:|.:|:|||:|.|:||.|||.:..||:|::||:|:||:.|..:|:|:.:.|||.||.|
  Rat   159 GVKPRGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVILTNQMGIGR 223

  Fly   224 GKINLDDFKVKIKHIVAKLGVPIQVFIAIGDGFYRKPLTGMWQHLKSEMNDGVEIQEDRCFFVGD 288
            ||:..:.||.|::.::.|||||.||.:|...|..|||::|||.||:.:.|:|:.|......||||
  Rat   224 GKLPAEVFKAKVEAVLEKLGVPFQVLVATHAGLNRKPVSGMWDHLQEKGNEGIPISIGDSVFVGD 288

  Fly   289 AAGRPETGKGATKRRKDHSLVDRLFAANVGISFYTPEVHFLGKQVEQWNKPDFEPTSVQDQVSLL 353
            ||||| ......|::||.|..|||||.|||:.|.|||..||.....::..|.|:|.::.....|.
  Rat   289 AAGRP-ANWAPGKKKKDFSCADRLFALNVGLPFATPEEFFLKWPAARFELPAFDPRTISSAGPLY 352

  Fly   354 DPD-DLTLDDHPCEMVIMVGLPGSGKSHFCSSFFQPRGYKIVNADTLGSTQNCLTACKRFLDSGQ 417
            .|: ...|..:| |:|:.||.||:|||.|........||..||.|||||.|.|:.:|:..|..|:
  Rat   353 LPESSFLLSPNP-EVVVAVGFPGAGKSTFIQKHLVSAGYVHVNRDTLGSWQRCVNSCQAALRQGK 416

  Fly   418 SCVVDNTNVDAASRKKFLQLASEKMIPCRCLVMNVPVAQVKHNIAFRELSDSARTKIKDMVFNMM 482
            ..|:||||.|..||.:::|.|.:..:||||......:.|.:||..|||::|.:...:.|||....
  Rat   417 QVVIDNTNPDIQSRARYIQCAKDAGVPCRCFSFCATIEQARHNNRFREMTDPSHAPVSDMVMFSY 481

  Fly   483 KKKYQEPALDEGFISIHKVNFK-PNFADEKQEKLY 516
            :|:::.|.|.|||:.|.:|.|: ....|...::||
  Rat   482 RKQFEPPTLAEGFLEILQVPFRLQEHLDPALQRLY 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9601NP_649792.3 PNK-3'Pase 9..522 CDD:130724 191/490 (39%)
FHA 26..115 CDD:238017 24/74 (32%)
HAD_like 170..288 CDD:119389 55/117 (47%)
NK 367..>440 CDD:302627 33/72 (46%)
PnkpNP_001004259.1 PNK-3'Pase 3..522 CDD:130724 191/490 (39%)
HAD_like 168..288 CDD:119389 55/119 (46%)
NK 366..>442 CDD:302627 33/75 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340639
Domainoid 1 1.000 173 1.000 Domainoid score I3602
eggNOG 1 0.900 - - E1_COG0241
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5247
Inparanoid 1 1.050 327 1.000 Inparanoid score I2388
OMA 1 1.010 - - QHG54768
OrthoDB 1 1.010 - - D1252087at2759
OrthoFinder 1 1.000 - - FOG0004625
OrthoInspector 1 1.000 - - oto96652
orthoMCL 1 0.900 - - OOG6_102580
Panther 1 1.100 - - LDO PTHR12083
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3825
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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