DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and ARFA1D

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_177206.1 Gene:ARFA1D / 843385 AraportID:AT1G70490 Length:181 Species:Arabidopsis thaliana


Alignment Length:178 Identity:80/178 - (44%)
Similarity:114/178 - (64%) Gaps:3/178 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGFLTVLKKMRQKEREMRILLLGLDNAGKTTILKRFN-GEPIDTISPTLGFNIKTLEHNGYTLNM 64
            :.|..:..::..| :|||||::|||.|||||||.:.. ||.:.|| ||:|||::|:|:...:..:
plant     3 LSFAKLFSRLFAK-KEMRILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTV 65

  Fly    65 WDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDL 129
            ||||||..:|..||:||::|.||::||||.||.|:.....||..:|.|:.|..|.|||..|||||
plant    66 WDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDL 130

  Fly   130 PGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDWLIADIA 177
            |.|:::.||.:.|.|..:...||.:....|.:||.|...:|||..:||
plant   131 PNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 78/172 (45%)
ARFA1DNP_177206.1 PLN00223 1..181 CDD:165788 80/178 (45%)

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