DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Arl2 and ARFD1B

DIOPT Version :9

Sequence 1:	NP_476886.1	Gene:	Arl2 / 40993	FlyBaseID:	FBgn0004908	Length:	184	Species:	Drosophila melanogaster
Sequence 2:	NP_171745.3	Gene:	ARFD1B / 839242	AraportID:	AT1G02430	Length:	190	Species:	Arabidopsis thaliana

Alignment Length:	181	Identity:	60/181 - (33%)
Similarity:	102/181 - (56%)	Gaps:	19/181 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    14 EREMRILLLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYW 77
            :.|.||:|.|||.|||::|:.:. .||.:.|..||:|.:::::::....|..|::|||:..:  |
plant    15 QEESRIVLFGLDAAGKSSIMHKLKTGETLTTTMPTIGTDVESVKYKDSNLRFWEMGGQQCYK--W 77

  Fly    78 ----RNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGA-----TLLVLCNKQDLPGAL 133
                ::.|:...|||.||||.||.|:|.....|..::.|  :.|:     .:||..||.::|||:
plant    78 FPMTKHDFQEIAGLVLVVDSTDRDRIEDAKDFLNAVIDE--IQGSVPDNVAVLVFGNKHEVPGAM 140

  Fly   134 SSNEIKEILHLEDIT----THHWLVAGVSAVTGEKLLSSMDWLIADIAKRI 180
            |::||...|.|..:.    ..:|.|....|.:|:.|...:|||:.: |:|:
plant   141 SASEISNKLDLTSLRQKNWQRNWHVQSSCAFSGDGLHEGLDWLLKN-AERM 190

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Arl2	NP_476886.1	Arl2	3..175	CDD:206720	58/174 (33%)
ARFD1B	NP_171745.3	Arf_Arl	19..186	CDD:206644	57/170 (34%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1271528at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010