DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl2 and ARFD1A

DIOPT Version :10

Sequence 1:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster
Sequence 2:NP_563652.1 Gene:ARFD1A / 839230 AraportID:AT1G02440 Length:190 Species:Arabidopsis thaliana


Alignment Length:179 Identity:60/179 - (33%)
Similarity:102/179 - (56%) Gaps:15/179 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EREMRILLLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSY- 76
            :.|.||:|.||...||::|:.:| .||.:.|..||:|.|::::::....|..|::|||:....: 
plant    15 QEEARIVLFGLGGTGKSSIMHKFKTGETLTTTMPTVGLNVESVKYKDSNLCFWEMGGQQCYMWFP 79

  Fly    77 -WRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAG-----ATLLVLCNKQDLPGALSS 135
             |:::|:...|||.||||..|.::|.....|.|::.|  :.|     |.:||..||.::|||:|:
plant    80 LWKHWFQEIAGLVLVVDSTGRDQIEETKDFLNVVIDE--IQGSVPDNAPVLVYGNKHEVPGAMSA 142

  Fly   136 NEIKEILHLEDIT----THHWLVAGVSAVTGEKLLSSMDWLIADIAKRI 180
            :||...|.|..:.    ..:|.|....|.:|:.|...:|||:.: |:|:
plant   143 SEISNKLDLTSLRKKNWQRNWHVQSSCAFSGDGLHEGLDWLLKN-AERM 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl2NP_476886.1 Arl2 3..175 CDD:206720 58/172 (34%)
ARFD1ANP_563652.1 Arf_Arl 19..186 CDD:206644 57/168 (34%)

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